CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031325_P001	Maize	plastid	68.77	73.41
TraesCS5D01G266000.1	Wheat	plastid	55.76	60.73
TraesCS5B01G257000.1	Wheat	plastid	55.02	60.16
TraesCS5A01G257700.1	Wheat	plastid	54.28	58.63
VIT_01s0010g02290.t01	Wine grape	cytosol	33.09	48.9
GSMUA_Achr10P...	Banana	cytosol	34.57	47.94
GSMUA_Achr1P17060_001	Banana	plastid	36.06	44.29
KRG97479	Soybean	cytosol	24.54	44.0
Solyc05g014280.2.1	Tomato	plastid	32.34	39.37
PGSC0003DMT400031252	Potato	plastid	32.71	38.94
KRH31411	Soybean	cytosol, plastid	31.6	36.17
KRG98734	Soybean	plastid	28.25	33.04
KRH46215	Soybean	plastid	27.14	32.3
EER95179	Sorghum	plastid	28.25	31.15
EES06474	Sorghum	mitochondrion	21.19	26.15

Protein Annotations

EnsemblPlants:KXG25677	EnsemblPlantsGene:SORBI_3007G217300	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF137	PFAM:PF00011	PFscan:PS01031
ProteinID:KXG25677	ProteinID:KXG25677.1	SEG:seg	SUPFAM:SSF49764	UniParc:UPI0003C739EA	UniProt:A0A1B6PJ42
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:64557039..64558623

Molecular Weight (calculated)

29260.2 Da

IEP (calculated)

9.499

GRAVY (calculated)

-0.643

Length

269 amino acids

Sequence
(BLAST)

001: MQHAAAVSNN LHPAVATTSS PAPRRASWPN ARPSSSVRVR SSSSSSMRNG GGGNGSASTD SLDHLQRASM ARQRQQQQQQ PRPRRVIHTT PFGLWDSFPE
101: ARTLDQMVRT MERLMDGDDD VRFGVVVPAA DAAAAGAPTA VPRADHGRRG RTPWEVRDRA GEYLVRFDMP GMARDDVRVS VQDRTLVVVA EKKQPAAGAD
201: EKQEAAGSGY EEEEGEAWPA ASFGRYRTRV ELPENVDVER IAAEVKDGVL YLTIPKLSAG GKVVNIQVH

Best Arabidopsis Sequence Match ( AT4G27670.1 )
(BLAST)

001: MASTLSFAAS ALCSPLAPSP SVSSKSATPF SVSFPRKIPS RIRAQDQREN SIDVVQQGQQ KGNQGSSVEK RPQQRLTMDV SPFGLLDPLS PMRTMRQMLD
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ

Arabidopsis Description

HSP21HSP21 [Source:UniProtKB/TrEMBL;Acc:A0A178UVU5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.