CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98734	Soybean	plastid	72.57	71.3
KRG97479	Soybean	cytosol	33.19	50.0
KRH31411	Soybean	cytosol, plastid	42.48	40.85
KRH47454	Soybean	cytosol	15.04	36.96
TraesCS5A01G257700.1	Wheat	plastid	36.73	33.33
TraesCS5D01G266000.1	Wheat	plastid	36.28	33.2
TraesCS5B01G257000.1	Wheat	plastid	35.4	32.52
KRH53604	Soybean	plastid	30.97	30.3
KRH64320	Soybean	plastid	30.53	29.87
Zm00001d031325_P001	Maize	plastid	30.97	27.78
KXG25677	Sorghum	plastid	32.3	27.14
KRH44453	Soybean	mitochondrion	21.24	21.33

Protein Annotations

EntrezGene:100791734	Gene3D:2.60.40.790	MapMan:35.1	InterPro:A-crystallin/Hsp20_dom	EMBL:ACUP02005329	EMBL:BT097177
UniProt:C6THQ1	EnsemblPlantsGene:GLYMA_08G318900	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978
EnsemblPlants:KRH46215	ProteinID:KRH46215	ProteinID:KRH46215.1	PFAM:PF00011	PFscan:PS01031	PANTHER:PTHR11527
PANTHER:PTHR11527:SF137	SUPFAM:SSF49764	UniParc:UPI0001B167A6	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:+:43813192..43814120

Molecular Weight (calculated)

25348.6 Da

IEP (calculated)

10.117

GRAVY (calculated)

-0.560

Length

226 amino acids

Sequence
(BLAST)

001: MASALPNVGF HARTSSSRMN KFSNVKLLPL TSKRNRTFCS NVKAMAGGET SLQKSKQQVQ PKMKVPQASP KVLLNQFPVA RTVQQMMDTM ERMVEDPLVY
101: GSTSPLIVVG DDEYSKGKIP WAIKEGQKDY KMRFNMPGMN KNDVKVWVEQ NMLVVKAEKA LQENHEGQAD GNEDWPANSY GRYNHRIALP ENIEFDKIKA
201: QVKDGILYVT IPKASTSSKV IGIDVQ

Best Arabidopsis Sequence Match ( AT4G27670.1 )
(BLAST)

001: MASTLSFAAS ALCSPLAPSP SVSSKSATPF SVSFPRKIPS RIRAQDQREN SIDVVQQGQQ KGNQGSSVEK RPQQRLTMDV SPFGLLDPLS PMRTMRQMLD
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ

Arabidopsis Description

HSP21HSP21 [Source:UniProtKB/TrEMBL;Acc:A0A178UVU5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.