CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46215	Soybean	plastid	71.3	72.57
KRG97479	Soybean	cytosol	33.04	50.67
KRH31411	Soybean	cytosol, plastid	40.43	39.57
KRH47454	Soybean	cytosol	13.91	34.78
TraesCS5A01G257700.1	Wheat	plastid	35.65	32.93
TraesCS5D01G266000.1	Wheat	plastid	34.78	32.39
TraesCS5B01G257000.1	Wheat	plastid	34.35	32.11
KRH53604	Soybean	plastid	29.57	29.44
KRH64320	Soybean	plastid	29.13	29.0
KXG25677	Sorghum	plastid	33.04	28.25
Zm00001d031325_P001	Maize	plastid	30.43	27.78
KRH44453	Soybean	mitochondrion	18.26	18.67

Protein Annotations

EntrezGene:100788249	Gene3D:2.60.40.790	MapMan:35.1	InterPro:A-crystallin/Hsp20_dom	EMBL:ACUP02010918	EnsemblPlantsGene:GLYMA_18G094600
InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	UniProt:K7MQU7	EnsemblPlants:KRG98734
ProteinID:KRG98734	ProteinID:KRG98734.1	PFAM:PF00011	PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF137
SUPFAM:SSF49764	UniParc:UPI000233E291	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:9649250..9650174

Molecular Weight (calculated)

25909.2 Da

IEP (calculated)

9.919

GRAVY (calculated)

-0.583

Length

230 amino acids

Sequence
(BLAST)

001: MASTVVPYMS FYAHTSSGRM NKFSNVKLLP VSSTRNRTFS YSVKAMAGGE ASLQKSNQHQ QQVQPKMKVP QGSPKVLLNQ FPVARTVQQM MDTMERMGED
101: LLVYGRTSPV IVAGDDEYSK GKIPWAIKEG QKDYKMRFNM PGMNKNDVKV WVEENMLVVK AEKALEENHE GRANGNEDWP ANSYGRYNHR IALPENIEFD
201: KIKAQVKDGI LYVTIPKSST SAKIIGIDVQ

Best Arabidopsis Sequence Match ( AT4G27670.1 )
(BLAST)

001: MASTLSFAAS ALCSPLAPSP SVSSKSATPF SVSFPRKIPS RIRAQDQREN SIDVVQQGQQ KGNQGSSVEK RPQQRLTMDV SPFGLLDPLS PMRTMRQMLD
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ

Arabidopsis Description

HSP21HSP21 [Source:UniProtKB/TrEMBL;Acc:A0A178UVU5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.