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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 10
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
BaCelLo:plastid
EpiLoc:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P28560_001 Banana plastid 56.6 55.88
AT4G27670.1 Thale cress plastid 49.36 51.1
Bra026317.1-P Field mustard plastid 47.23 49.55
CDY19036 Canola plastid 47.23 49.55
CDY30235 Canola plastid 47.23 49.55
CDY55343 Canola plastid 47.23 49.55
PGSC0003DMT400008351 Potato plastid 48.94 49.36
Solyc03g082420.2.1 Tomato plastid 47.66 47.66
KRH53604 Soybean plastid 46.38 47.19
Os03t0245800-02 Rice plastid 48.09 47.08
TraesCS4A01G068200.1 Wheat mitochondrion 47.66 47.06
TraesCS4B01G225400.1 Wheat plastid 48.51 46.91
KRH64320 Soybean plastid 45.96 46.75
TraesCS4A01G068300.1 Wheat plastid 47.23 46.44
EER95179 Sorghum plastid 48.09 46.31
TraesCS4D01G226000.1 Wheat mitochondrion 46.81 46.22
VIT_16s0098g01060.t01 Wine grape plastid 44.26 45.81
Zm00001d028408_P001 Maize plastid 44.68 43.75
HORVU4Hr1G063350.1 Barley mitochondrion 49.79 38.49
GSMUA_Achr10P... Banana cytosol 28.51 34.54
GSMUA_Achr1P17060_001 Banana plastid 30.64 32.88
GSMUA_Achr9P28520_001 Banana mitochondrion 19.57 20.09
Os03t0835700-00 Rice plastid 15.74 19.89
Protein Annotations
EnsemblPlants:GSMUA_Achr2P12540_001EnsemblPlants:GSMUA_Achr2T12540_001EnsemblPlantsGene:GSMUA_Achr2G12540_001Gene3D:2.60.40.790InterPro:A-crystallin/Hsp20_domInterPro:HSP20
InterPro:HSP20-like_chaperoneInterPro:IPR002068InterPro:IPR008978PANTHER:PTHR11527PANTHER:PTHR11527:SF167PFAM:PF00011
PFscan:PS01031SEG:segSUPFAM:SSF49764UniParc:UPI000294BF6AUniProt:M0S7E5MapMan:19.1.8.11
Description
Small heat shock protein, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr2G12540_001]
Coordinates
chr2:-:14982791..14983825
Molecular Weight (calculated)
25934.9 Da
IEP (calculated)
8.218
GRAVY (calculated)
-0.559
Length
235 amino acids
Sequence
(BLAST)
001: MASATTLPGL VLRPSPLLSG QALRRKQRQP STVASPSPSC RRRLSVSASA APQSKETSSS IDVHVNKDAK AGNGAAIEQR RRRSGFDVSP FGLVDAVSPM
101: RTMKMMLDTM DRLFEDAMSF PGSSTGEMRP PWEIKEEDNE ITMRFDVPGL SKEEVKVSVE DDVLVIKGEH KEQEATAAGE ESKWRGWSSS SYDSRFLLPD
201: NCDKEKVKAE LKNGVLLVVI PKTKTDRKVI DVEIQ
Best Arabidopsis Sequence Match ( AT4G27670.1 )
(BLAST)
001: MASTLSFAAS ALCSPLAPSP SVSSKSATPF SVSFPRKIPS RIRAQDQREN SIDVVQQGQQ KGNQGSSVEK RPQQRLTMDV SPFGLLDPLS PMRTMRQMLD
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ
Arabidopsis Description
HSP21HSP21 [Source:UniProtKB/TrEMBL;Acc:A0A178UVU5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.