Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30235 | Canola | plastid | 69.6 | 70.54 |
| CDY55343 | Canola | plastid | 69.6 | 70.54 |
| Bra026317.1-P | Field mustard | plastid | 68.72 | 69.64 |
| CDY19036 | Canola | plastid | 68.28 | 69.2 |
| VIT_16s0098g01060.t01 | Wine grape | plastid | 56.83 | 56.83 |
| KRH53604 | Soybean | plastid | 56.83 | 55.84 |
| PGSC0003DMT400008351 | Potato | plastid | 57.27 | 55.79 |
| KRH64320 | Soybean | plastid | 55.51 | 54.55 |
| Solyc03g082420.2.1 | Tomato | plastid | 53.74 | 51.91 |
| GSMUA_Achr2P12540_001 | Banana | plastid | 51.1 | 49.36 |
| Zm00001d028408_P001 | Maize | plastid | 48.02 | 45.42 |
| EER95179 | Sorghum | plastid | 47.58 | 44.26 |
| TraesCS4A01G068200.1 | Wheat | mitochondrion | 46.26 | 44.12 |
| TraesCS4D01G226000.1 | Wheat | mitochondrion | 46.26 | 44.12 |
| TraesCS4A01G068300.1 | Wheat | plastid | 46.26 | 43.93 |
| Os03t0245800-02 | Rice | plastid | 46.26 | 43.75 |
| TraesCS4B01G225400.1 | Wheat | plastid | 45.37 | 42.39 |
| GSMUA_Achr4P28560_001 | Banana | plastid | 40.09 | 38.24 |
| HORVU4Hr1G063350.1 | Barley | mitochondrion | 44.93 | 33.55 |
| AT1G52560.1 | Thale cress | mitochondrion | 25.55 | 25.0 |
| Os03t0835700-00 | Rice | plastid | 17.62 | 21.51 |
Protein Annotations
| MapMan:19.1.8.11 | Gene3D:2.60.40.790 | PDB:5NMS | EntrezGene:828881 | InterPro:A-crystallin/Hsp20_dom | UniProt:A0A178UVU5 |
| ProteinID:AAA32818.1 | ProteinID:AEE85379.1 | EMBL:AK119078 | ArrayExpress:AT4G27670 | EnsemblPlantsGene:AT4G27670 | RefSeq:AT4G27670 |
| TAIR:AT4G27670 | RefSeq:AT4G27670-TAIR-G | EnsemblPlants:AT4G27670.1 | TAIR:AT4G27670.1 | Unigene:At.5368 | ProteinID:CAB38279.1 |
| ProteinID:CAB81417.1 | EMBL:DQ446875 | EMBL:DQ653229 | GO:GO:0000427 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009408 | GO:GO:0009416 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 | GO:GO:0009644 |
| GO:GO:0009658 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0042542 | GO:GO:0042644 | GO:GO:0043621 |
| GO:GO:0101031 | InterPro:HSP20 | InterPro:HSP20-like_chaperone | Symbol:HSP21 | InterPro:IPR002068 | InterPro:IPR008978 |
| RefSeq:NP_194497.1 | ProteinID:OAO98059.1 | UniProt:P31170 | PFAM:PF00011 | PO:PO:0007616 | PO:PO:0009052 |
| PFscan:PS01031 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF167 | SUPFAM:SSF49764 | UniParc:UPI000000420C | EMBL:X54102 |
| SEG:seg | : | : | : | : | : |
Description
HSP21HSP21 [Source:UniProtKB/TrEMBL;Acc:A0A178UVU5]
Coordinates
chr4:-:13818825..13819971
Molecular Weight (calculated)
25345.3 Da
IEP (calculated)
8.719
GRAVY (calculated)
-0.641
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTLSFAAS ALCSPLAPSP SVSSKSATPF SVSFPRKIPS RIRAQDQREN SIDVVQQGQQ KGNQGSSVEK RPQQRLTMDV SPFGLLDPLS PMRTMRQMLD
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.