Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G226000.1 | Wheat | mitochondrion | 27.96 | 21.85 |
| Os03t0245800-02 | Rice | plastid | 27.96 | 21.67 |
| TraesCS4A01G068200.1 | Wheat | mitochondrion | 26.88 | 21.01 |
| TraesCS4A01G068300.1 | Wheat | plastid | 26.88 | 20.92 |
| TraesCS4B01G225400.1 | Wheat | plastid | 26.88 | 20.58 |
| VIT_16s0098g01060.t01 | Wine grape | plastid | 24.73 | 20.26 |
| EER95179 | Sorghum | plastid | 25.27 | 19.26 |
| Bra026317.1-P | Field mustard | plastid | 23.12 | 19.2 |
| CDY19036 | Canola | plastid | 23.12 | 19.2 |
| CDY30235 | Canola | plastid | 23.12 | 19.2 |
| CDY55343 | Canola | plastid | 23.12 | 19.2 |
| Solyc03g082420.2.1 | Tomato | plastid | 24.19 | 19.15 |
| PGSC0003DMT400008351 | Potato | plastid | 23.12 | 18.45 |
| Zm00001d028408_P001 | Maize | plastid | 23.66 | 18.33 |
| KRH64320 | Soybean | plastid | 22.58 | 18.18 |
| HORVU4Hr1G063350.1 | Barley | mitochondrion | 29.03 | 17.76 |
| AT4G27670.1 | Thale cress | plastid | 21.51 | 17.62 |
| KRH53604 | Soybean | plastid | 21.51 | 17.32 |
| GSMUA_Achr2P12540_001 | Banana | plastid | 19.89 | 15.74 |
| GSMUA_Achr4P28560_001 | Banana | plastid | 18.28 | 14.29 |
| Os02t0201000-02 | Rice | mitochondrion | 13.44 | 11.42 |
Protein Annotations
| EnsemblPlants:Os03t0835700-00 | EnsemblPlantsGene:Os03g0835700 | Gene3D:2.60.40.790 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 |
| PANTHER:PTHR11527:SF124 | PFAM:PF00011 | PFscan:PS01031 | ProteinID:BAS87249.1 | SEG:seg | SUPFAM:SSF49764 |
| TMHMM:TMhelix | UniParc:UPI0003938FF4 | UniProt:A0A0N7KIC7 | MapMan:35.1 | : | : |
Description
Heat shock protein Hsp20 domain containing protein. (Os03t0835700-00)
Coordinates
chr3:-:35113637..35114321
Molecular Weight (calculated)
19845.9 Da
IEP (calculated)
6.266
GRAVY (calculated)
-0.067
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGTVKAMVD ATSPTISISM LLISSLFGSA TVGPFALVTR VSPVACLPIR AAWRSTSGNR TVGTSRGMSC SARSALNNIS PFALVDLITD AVDTIDAGHD
101: RLNVQQCHAG VPRRAVEIAG DREGADMLRD IMDDDKRGEI RFDMLGLSRE DVKVMVEDNM LVIRGEHSKE EKERGAPTMG GGRSAA
101: RLNVQQCHAG VPRRAVEIAG DREGADMLRD IMDDDKRGEI RFDMLGLSRE DVKVMVEDNM LVIRGEHSKE EKERGAPTMG GGRSAA
001: MASTLSFAAS ALCSPLAPSP SVSSKSATPF SVSFPRKIPS RIRAQDQREN SIDVVQQGQQ KGNQGSSVEK RPQQRLTMDV SPFGLLDPLS PMRTMRQMLD
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ
Arabidopsis Description
HSP21HSP21 [Source:UniProtKB/TrEMBL;Acc:A0A178UVU5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.