Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G068200.1 | Wheat | mitochondrion | 88.7 | 89.08 |
| EER95179 | Sorghum | plastid | 78.24 | 76.64 |
| Zm00001d028408_P001 | Maize | plastid | 74.06 | 73.75 |
| Os03t0245800-02 | Rice | plastid | 69.46 | 69.17 |
| PGSC0003DMT400008351 | Potato | plastid | 47.7 | 48.93 |
| Solyc03g082420.2.1 | Tomato | plastid | 47.7 | 48.51 |
| GSMUA_Achr2P12540_001 | Banana | plastid | 46.44 | 47.23 |
| VIT_16s0098g01060.t01 | Wine grape | plastid | 43.93 | 46.26 |
| AT4G27670.1 | Thale cress | plastid | 43.93 | 46.26 |
| KRH64320 | Soybean | plastid | 44.35 | 45.89 |
| KRH53604 | Soybean | plastid | 44.35 | 45.89 |
| CDY19036 | Canola | plastid | 42.68 | 45.54 |
| CDY55343 | Canola | plastid | 42.26 | 45.09 |
| CDY30235 | Canola | plastid | 42.26 | 45.09 |
| Bra026317.1-P | Field mustard | plastid | 42.26 | 45.09 |
| GSMUA_Achr4P28560_001 | Banana | plastid | 38.91 | 39.08 |
| Os03t0835700-00 | Rice | plastid | 20.92 | 26.88 |
| TraesCS5A01G257700.1 | Wheat | plastid | 26.36 | 25.3 |
| TraesCS6A01G181700.1 | Wheat | plastid | 25.94 | 23.48 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G068300.1 | EnsemblPlantsGene:TraesCS4A01G068300 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF167 | PFAM:PF00011 | PFscan:PS01031 |
| SEG:seg | SUPFAM:SSF49764 | TIGR:cd06464 | MapMan:19.1.8.11 | : | : |
Description
No Description!
Coordinates
chr4A:-:66801645..66802451
Molecular Weight (calculated)
26449.4 Da
IEP (calculated)
6.813
GRAVY (calculated)
-0.611
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAANAPFAI VSRLSPAARL PIRAWRAARP APLSTGGRTR PLSVASAAQE NRDNSVDVHV SRQDGGNQQG NAVQRRPRHA GFDISPFGLV DPMSPMRTMR
101: QMLDTMDRLF DDAVGFPTAR RSPAAASETP RMPWDIMEDD KEVKMRFDMP GLSREEVKVM VEGDALVIRG EHKEEAGEGQ GEGGDGWWKE RSVSSYDMRL
201: ALPDECDKSQ VRAELKNGVL LVSVPKRETE RKVIDVQVQ
101: QMLDTMDRLF DDAVGFPTAR RSPAAASETP RMPWDIMEDD KEVKMRFDMP GLSREEVKVM VEGDALVIRG EHKEEAGEGQ GEGGDGWWKE RSVSSYDMRL
201: ALPDECDKSQ VRAELKNGVL LVSVPKRETE RKVIDVQVQ
001: MASTLSFAAS ALCSPLAPSP SVSSKSATPF SVSFPRKIPS RIRAQDQREN SIDVVQQGQQ KGNQGSSVEK RPQQRLTMDV SPFGLLDPLS PMRTMRQMLD
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ
Arabidopsis Description
HSP21HSP21 [Source:UniProtKB/TrEMBL;Acc:A0A178UVU5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.