Factsheet for Bra026317.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19036	Canola	plastid	97.77	97.77
CDY55343	Canola	plastid	97.77	97.77
CDY30235	Canola	plastid	96.88	96.88
AT4G27670.1	Thale cress	plastid	69.64	68.72
KRH53604	Soybean	plastid	59.38	57.58
KRH64320	Soybean	plastid	58.93	57.14
VIT_16s0098g01060.t01	Wine grape	plastid	56.25	55.51
PGSC0003DMT400008351	Potato	plastid	53.12	51.07
Solyc03g082420.2.1	Tomato	plastid	53.57	51.06
GSMUA_Achr2P12540_001	Banana	plastid	49.55	47.23
EER95179	Sorghum	plastid	48.66	44.67
TraesCS4A01G068200.1	Wheat	mitochondrion	46.88	44.12
Zm00001d028408_P001	Maize	plastid	45.98	42.92
TraesCS4B01G225400.1	Wheat	plastid	46.43	42.8
Os03t0245800-02	Rice	plastid	45.54	42.5
TraesCS4D01G226000.1	Wheat	mitochondrion	45.09	42.44
TraesCS4A01G068300.1	Wheat	plastid	45.09	42.26
GSMUA_Achr4P28560_001	Banana	plastid	40.62	38.24
HORVU4Hr1G063350.1	Barley	mitochondrion	46.88	34.54
Bra018972.1-P	Field mustard	cytosol	24.55	28.8
Os03t0835700-00	Rice	plastid	19.2	23.12

Protein Annotations

MapMan:19.1.8.11	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	EnsemblPlantsGene:Bra026317	EnsemblPlants:Bra026317.1	EnsemblPlants:Bra026317.1-P
GO:GO:0000427	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009408	GO:GO:0009416	GO:GO:0009536	GO:GO:0009628
GO:GO:0009644	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0042542	GO:GO:0042644
GO:GO:0043621	GO:GO:0101031	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978
UniProt:M4EC08	PFAM:PF00011	PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF167	SUPFAM:SSF49764
UniParc:UPI0002545920	SEG:seg	:	:	:	:

Description

AT4G27670 (E=2e-092) HSP21 | HSP21 (HEAT SHOCK PROTEIN 21)

Coordinates

chrA01:-:10066500..10067268

Molecular Weight (calculated)

25094.1 Da

IEP (calculated)

9.169

GRAVY (calculated)

-0.641

Length

224 amino acids

Sequence
(BLAST)

001: MASTLSFTSS LRSPLAFPPS SKPTSSFSVS FPRKIPCKIR AQDQRSDSLD VVHQGQKGNQ GSSVEKKPQR LAMDVSPFGL LDPLSPMRTM RQMLDTMDRM
101: FDDAAMIVPG RNRGGGSGVS EIRAPWDMKE EEHEIKMRFD MPGLSKEDVK VSVEDNVLVI KGEQKKEDEN DSWSGRSFSS YGTRLQLPDN CEKDKIKAEL
201: KNGVLFITIP KTKVERKVVD VQIQ

Best Arabidopsis Sequence Match ( AT4G27670.1 )
(BLAST)

001: MASTLSFAAS ALCSPLAPSP SVSSKSATPF SVSFPRKIPS RIRAQDQREN SIDVVQQGQQ KGNQGSSVEK RPQQRLTMDV SPFGLLDPLS PMRTMRQMLD
101: TMDRMFEDTM PVSGRNRGGS GVSEIRAPWD IKEEEHEIKM RFDMPGLSKE DVKISVEDNV LVIKGEQKKE DSDDSWSGRS VSSYGTRLQL PDNCEKDKIK
201: AELKNGVLFI TIPKTKVERK VIDVQIQ

Arabidopsis Description

HSP21HSP21 [Source:UniProtKB/TrEMBL;Acc:A0A178UVU5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.