Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU90613 | Sorghum | cytosol | 95.4 | 94.25 |
| Zm00001d034842_P001 | Maize | cytosol | 93.64 | 87.04 |
| HORVU5Hr1G121540.1 | Barley | cytosol | 83.9 | 83.9 |
| TraesCS5B01G549700.1 | Wheat | cytosol | 85.52 | 82.72 |
| Os03t0849600-01 | Rice | cytosol | 84.03 | 82.36 |
| TraesCS5D01G536700.1 | Wheat | cytosol | 85.11 | 82.33 |
| TraesCS4A01G335400.1 | Wheat | cytosol | 85.11 | 82.01 |
| GSMUA_AchrUn_... | Banana | cytosol | 66.58 | 65.6 |
| Solyc08g006660.1.1 | Tomato | plastid | 59.68 | 59.43 |
| PGSC0003DMT400067640 | Potato | cytosol, plastid | 59.54 | 59.3 |
| KRH03947 | Soybean | cytosol | 60.22 | 58.94 |
| VIT_17s0000g01560.t01 | Wine grape | cytosol | 59.4 | 58.46 |
| KRH57220 | Soybean | cytosol | 59.0 | 57.75 |
| Bra013840.1-P | Field mustard | mitochondrion | 51.01 | 57.56 |
| AT4G24840.1 | Thale cress | cytosol, plastid | 58.73 | 57.41 |
| CDX92658 | Canola | plastid | 57.51 | 56.14 |
| CDY11039 | Canola | cytosol | 57.37 | 56.01 |
| CDY34317 | Canola | cytosol, plastid | 57.37 | 55.94 |
| CDY03412 | Canola | plastid | 57.1 | 55.53 |
| CDX70811 | Canola | plastid | 52.1 | 53.1 |
| CDY51233 | Canola | cytosol, plastid | 51.56 | 52.62 |
| Bra006453.1-P | Field mustard | cytosol, plastid | 51.42 | 52.49 |
| Bra019205.1-P | Field mustard | cytosol | 57.51 | 49.88 |
Protein Annotations
| EnsemblPlants:Zm00001d012851_P001 | EnsemblPlants:Zm00001d012851_T001 | EnsemblPlantsGene:Zm00001d012851 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0007030 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016043 | InterPro:COG2 |
| InterPro:COG_complex_COG2_C | InterPro:COG_su2_N | ncoils:Coil | PANTHER:PTHR12961 | PFAM:PF06148 | PFAM:PF12022 |
| ProteinID:AQK61584.1 | SEG:seg | UniParc:UPI0002218DA1 | UniProt:A0A1D6GD83 | MapMan:22.6.2.2 | : |
Description
Oligomeric Golgi complex subunit 2
Coordinates
chr5:+:1092746..1099057
Molecular Weight (calculated)
81789.9 Da
IEP (calculated)
5.978
GRAVY (calculated)
-0.109
Length
739 amino acids
Sequence
(BLAST)
(BLAST)
001: MADLATDLFG EPIEAHPPWF KPDAFLRASF DPDAYVAELR SYVPLESLAA ELRAHLDALR AELVGLINRD YADFVGLSAR LKGVDAAAAR MRAPLADLRD
101: KVAAFRAGAS AALAALRAGL EQRAAAAAAR ELLELLLDAF HVVSKVEKLI KELPTAPSDL SNAEVPNSDT GTPNGVAGTG VSETQSILLE RIASEMNRLK
201: FYISHAQNLP FIENMEKRVQ GATKLLDGSL ERCFVDGLEH RDAKVIYNCL RAYAAIDNTS SAEELFRTAV VSPLIQKIIP QNYARAVAGA SSDELEEDYQ
301: QIKECVQKDC KFILEISSSE NSGLHVFDFL GNSILKEVLS TIQKGKPGAF SPGKPKEFLR NYKASLGFLD FLEGYCISKS AVTKFRSELA YTDFMRQWNV
401: GVYFSLRFQE IAGGLDSTLT NTFSPTGLNE AQGKPLLLKQ SIKLLESLDS CWSDEVLVFS HCDKFLRLSL QLISRYTTWL SSGLTARKAS DGSPNSPADA
501: EWALSIPIED FIYIMHDVHA VIGELSESGS FIGHVNQLLG SCPIEVFNLV KQSILQAVEP LKERLPAIIN VMIGIIVKKS NEDLKHLKGI TATYRMTSKL
601: PVRHSPYVSG ILHPLKVFLE GDRIRYLSED DKTKLCRGST DKITAIYYDL VSEVVTVARK TESSLQRLRQ GAQRRVGAST DASDNIISDT DKICMQLFLD
701: IQEYARNLRA IGIDAREIDS YRALWQCVAP KDRQENIQF
101: KVAAFRAGAS AALAALRAGL EQRAAAAAAR ELLELLLDAF HVVSKVEKLI KELPTAPSDL SNAEVPNSDT GTPNGVAGTG VSETQSILLE RIASEMNRLK
201: FYISHAQNLP FIENMEKRVQ GATKLLDGSL ERCFVDGLEH RDAKVIYNCL RAYAAIDNTS SAEELFRTAV VSPLIQKIIP QNYARAVAGA SSDELEEDYQ
301: QIKECVQKDC KFILEISSSE NSGLHVFDFL GNSILKEVLS TIQKGKPGAF SPGKPKEFLR NYKASLGFLD FLEGYCISKS AVTKFRSELA YTDFMRQWNV
401: GVYFSLRFQE IAGGLDSTLT NTFSPTGLNE AQGKPLLLKQ SIKLLESLDS CWSDEVLVFS HCDKFLRLSL QLISRYTTWL SSGLTARKAS DGSPNSPADA
501: EWALSIPIED FIYIMHDVHA VIGELSESGS FIGHVNQLLG SCPIEVFNLV KQSILQAVEP LKERLPAIIN VMIGIIVKKS NEDLKHLKGI TATYRMTSKL
601: PVRHSPYVSG ILHPLKVFLE GDRIRYLSED DKTKLCRGST DKITAIYYDL VSEVVTVARK TESSLQRLRQ GAQRRVGAST DASDNIISDT DKICMQLFLD
701: IQEYARNLRA IGIDAREIDS YRALWQCVAP KDRQENIQF
001: MSDLVATSPS PSSAPRSATD FFSDPYDSHP LWFKPSLFLS PNFDSESYIS ELRTFVPFDT LRSELRSHLA SLNRELVDLI NRDYADFVNL STKLVDIDAA
101: VVRMRAPLLE LREKITGFRG SVEAALFALR NGLQQRSDAA AAREVLELLL DTFHVVSKVE KLIKVLPSTP SDWQNEDANS MGRSSMNDEN STQQDGTTMR
201: ETQSMLLERI ASEMNRLKFY MAHAQNLPFI ENMEKRIQSA SVLLDASLGH CFIDGLNNSD TSVLYNCLRA YAAIDNTNAA EEIFRTTIVA PFIQKIITHE
301: TTTNAAGTSE DELENDYKQI KHFIAKDCKM LLEISSTDKS GLHVFDFLAN SILKEVLWAI QKVKPGAFSP GRPTEFLKNY KASLDFLAYL EGYCPSRSAV
401: TKFRAEAICV EFMKQWNVGV YFSLRFQEIA GALDSALTSP SLVFIQDSDK ESSLNLILRQ SDTLLECLRS CWKEDVLVFS AADKFLRLTL QLLSRYSFWV
501: SSALNNRKSN ASPSPGCEWA VSATAEDFVY VIHDVNCLVS EVCGDYLGHI SQYLSSSSTE VLDVVRISIE QGGVSLEKVL PLLTKTIIDV IVDKSVEDLR
601: QLRGITATFR MTNKPLPVRH SPYVVGLLRP VKAFLEGDKA RNYLTQKTKE ELLHGSVSEI TRRYYELAAD VVSVARKTQS SLQKLRQNAQ RRGGAASGVS
701: DQNVSETDKM CMQLFLDIQE YGRNVSALGL KPADIPEYCS FWQCVAPADR QNSISV
101: VVRMRAPLLE LREKITGFRG SVEAALFALR NGLQQRSDAA AAREVLELLL DTFHVVSKVE KLIKVLPSTP SDWQNEDANS MGRSSMNDEN STQQDGTTMR
201: ETQSMLLERI ASEMNRLKFY MAHAQNLPFI ENMEKRIQSA SVLLDASLGH CFIDGLNNSD TSVLYNCLRA YAAIDNTNAA EEIFRTTIVA PFIQKIITHE
301: TTTNAAGTSE DELENDYKQI KHFIAKDCKM LLEISSTDKS GLHVFDFLAN SILKEVLWAI QKVKPGAFSP GRPTEFLKNY KASLDFLAYL EGYCPSRSAV
401: TKFRAEAICV EFMKQWNVGV YFSLRFQEIA GALDSALTSP SLVFIQDSDK ESSLNLILRQ SDTLLECLRS CWKEDVLVFS AADKFLRLTL QLLSRYSFWV
501: SSALNNRKSN ASPSPGCEWA VSATAEDFVY VIHDVNCLVS EVCGDYLGHI SQYLSSSSTE VLDVVRISIE QGGVSLEKVL PLLTKTIIDV IVDKSVEDLR
601: QLRGITATFR MTNKPLPVRH SPYVVGLLRP VKAFLEGDKA RNYLTQKTKE ELLHGSVSEI TRRYYELAAD VVSVARKTQS SLQKLRQNAQ RRGGAASGVS
701: DQNVSETDKM CMQLFLDIQE YGRNVSALGL KPADIPEYCS FWQCVAPADR QNSISV
Arabidopsis Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport, Golgi organization; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: COG complex component, COG2 (InterP /.../009316); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24840]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.