Factsheet for Zm00001d048022_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d006805_P001
Zm00001d017475_P002
Zm00001d028871_P001
Zm00001d030019_P001
Zm00001d047057_P001
Zm00001d053677_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31780.1	Zm00001d017475_P002	AT3G48150.1	21798944
AT1G31780.1	Zm00001d030019_P001	AT3G60150.1	21798944
AT1G31780.1	Zm00001d047057_P001	AT3G60150.1	21798944
AT1G31780.1	Zm00001d006805_P001	AT5G11980.1	21798944
AT1G31780.1	Zm00001d028871_P001	AT5G11980.1	21798944
AT1G31780.1	Zm00001d053677_P001	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028279_P001	Maize	mitochondrion	83.49	12.87
PGSC0003DMT400004938	Potato	cytosol	48.62	10.41
KRH28986	Soybean	cytosol, mitochondrion, nucleus	51.38	8.08
Bra023203.1-P	Field mustard	plastid	50.46	8.08
CDY49154	Canola	plastid	50.46	8.08
CDY12296	Canola	plastid	49.54	7.93
VIT_02s0012g00920.t01	Wine grape	mitochondrion	49.54	7.83
AT1G31780.1	Thale cress	cytosol	48.62	7.79
GSMUA_Achr8P14460_001	Banana	mitochondrion	47.71	7.41
Solyc08g075440.2.1	Tomato	plastid	45.87	7.24
KRH76471	Soybean	cytosol, mitochondrion, nucleus	3.67	0.94
KRG90345	Soybean	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d048022_P001	EnsemblPlants:Zm00001d048022_T001	EnsemblPlantsGene:Zm00001d048022	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006891	GO:GO:0008150	GO:GO:0017119
InterPro:COG6	PFAM:PF06419	ProteinID:AQL08338.1	UniParc:UPI0008440DBD	UniProt:A0A1D6PFS3	MapMan:35.2

Description

No Description!

Coordinates

chr9:-:148207056..148207469

Molecular Weight (calculated)

12500.2 Da

IEP (calculated)

9.494

GRAVY (calculated)

-0.372

Length

109 amino acids

Sequence
(BLAST)

001: MGQEVATSYV NNLRSMIEVH IRALVDKEVD NILRKCGLSN KMPYIKEYGS KVDARRFLCL NLSNCRVPRL RSNACYGLAR ALAESYNNYP DPRSLVKHSP
101: EQIRTILEI

Best Arabidopsis Sequence Match ( AT1G31780.1 )
(BLAST)

001: MASTVGLAPG LSRKLKKVLD CRTDSPDLVA SLNALSSFYD ENSAHARRNL RSTIEKRALQ INSEFLNAAD STQIALDRVE EEVNALADCC DKIAAALSSS
101: AATTSDIIST TERLKQELEV TTQRQEIVNC FLRDYQLSNE EIKALREDEL NENFFQALSH VQEIHSNCKL LLRTHHQRAG LELMDMMAVY QEGAYERLCR
201: WVQAECRKLG DTDNPEVSEL LRTAVRCLKE RPVLFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADH QSNAKNTSEN IALKAGESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA VDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKKSGQLPRR SRTSSDSSQL
501: TSVDALLSSS PSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG LMIENHINLL VQNEVDTLLH KCGLSDKMQI FRSSTSELPL SERQDTSPAM
601: LSECLKAFFG LVLGSEGSLP EFEQIQVPKL RSEACVRVAK TLAEAYEVIY QAVTDQQNGY PDPKSLARHP PDQIRTILGI

Arabidopsis Description

At1g31780 [Source:UniProtKB/TrEMBL;Acc:Q6NMI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.