Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d023865_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G60150.1 | Zm00001d023865_P001 | AT3G21400.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G216000.1 | Wheat | mitochondrion | 73.58 | 82.08 |
| TraesCS1A01G213100.1 | Wheat | mitochondrion | 73.06 | 81.5 |
| EER94458 | Sorghum | cytosol, plastid | 84.46 | 81.5 |
| TraesCS1B01G226600.1 | Wheat | mitochondrion | 72.54 | 80.92 |
| Os10t0571100-01 | Rice | mitochondrion | 50.26 | 80.17 |
| Os03t0590700-01 | Rice | cytosol | 29.02 | 78.87 |
| Zm00001d030019_P001 | Maize | mitochondrion | 79.27 | 72.86 |
| KRH66350 | Soybean | mitochondrion | 60.1 | 66.67 |
| GSMUA_Achr1P00650_001 | Banana | cytosol | 64.25 | 65.96 |
| VIT_15s0021g00450.t01 | Wine grape | mitochondrion | 57.51 | 64.53 |
| AT2G44525.1 | Thale cress | mitochondrion | 55.96 | 63.53 |
| Solyc01g088350.2.1 | Tomato | mitochondrion | 56.48 | 63.37 |
| CDY42670 | Canola | mitochondrion | 53.37 | 63.19 |
| CDX89051 | Canola | mitochondrion | 53.37 | 63.19 |
| Bra014509.1-P | Field mustard | mitochondrion | 53.37 | 63.19 |
| CDX74663 | Canola | mitochondrion | 55.44 | 62.94 |
| Bra004843.1-P | Field mustard | mitochondrion | 55.44 | 62.94 |
| CDY47676 | Canola | mitochondrion | 54.92 | 62.35 |
| AT3G60150.1 | Thale cress | mitochondrion | 54.92 | 62.35 |
| CDX74665 | Canola | cytosol | 28.5 | 53.92 |
Protein Annotations
| EnsemblPlants:Zm00001d047057_P001 | EnsemblPlants:Zm00001d047057_T001 | EnsemblPlantsGene:Zm00001d047057 | EntrezGene:103638906 | Gene3D:3.40.1230.10 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0032981 | InterPro:IPR036748 | InterPro:MTH938-like_sf | InterPro:NDUF3 |
| InterPro:NDUFAF3/AAMDC | PANTHER:PTHR21192 | PANTHER:PTHR21192:SF2 | PFAM:PF04430 | ProteinID:AQL05507.1 | SUPFAM:SSF64076 |
| UniParc:UPI0008459A18 | UniProt:A0A1D6P6M4 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr9:-:116820887..116826968
Molecular Weight (calculated)
21471.0 Da
IEP (calculated)
8.472
GRAVY (calculated)
-0.015
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAWGQKAL GALPQLVKSL RSDPVSGSAR HRRLPSLRRT FSLYDQINLI DSVPEDELRF QSSVLTGTLD QVSQVWFAVC RYDDTGFKIN NVKYEGSVLI
101: VENKIMTWAP KTFSEITPES LSIFKVVHPI PEIFILGCGR HVQLVSPELR MFIRSTGMKL EAVDSRNAAS TYNILNEEGR PVAAAVLPYG VTC
101: VENKIMTWAP KTFSEITPES LSIFKVVHPI PEIFILGCGR HVQLVSPELR MFIRSTGMKL EAVDSRNAAS TYNILNEEGR PVAAAVLPYG VTC
001: MAMRLKSMAT LPKLIQSMRK EVPKHSNPVL PSLRRAFSLY DQINLIDNVP EDQLRFQEFN DTSFTVNGVK YEGSLLCVGN LLMSWSPRKF SEITTDSLSI
101: FQTVRPIPEL LIVGCGRDIH PVTPEVRQFV KSLGMKLETV DSRNAASTYN ILNEEGRVVA AALLPYGVTS
101: FQTVRPIPEL LIVGCGRDIH PVTPEVRQFV KSLGMKLETV DSRNAASTYN ILNEEGRVVA AALLPYGVTS
Arabidopsis Description
At2g44525 [Source:UniProtKB/TrEMBL;Acc:Q8RUX8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.