Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
27297264
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES16100 | Sorghum | plastid | 65.35 | 86.91 |
| TraesCS5B01G100200.1 | Wheat | mitochondrion | 55.91 | 73.96 |
| TraesCS5A01G094100.1 | Wheat | mitochondrion | 55.91 | 72.82 |
| Os12t0540700-01 | Rice | cytosol, mitochondrion, nucleus | 47.64 | 66.12 |
| Solyc01g067080.2.1 | Tomato | cytosol | 23.62 | 52.63 |
| PGSC0003DMT400058346 | Potato | mitochondrion | 31.5 | 43.96 |
| GSMUA_AchrUn_... | Banana | cytosol | 27.17 | 43.95 |
| CDY55284 | Canola | nucleus | 29.53 | 42.37 |
| AT3G21400.1 | Thale cress | nucleus | 31.1 | 42.02 |
| CDY32427 | Canola | mitochondrion | 31.5 | 41.88 |
| VIT_05s0020g01370.t01 | Wine grape | mitochondrion, nucleus | 31.5 | 41.67 |
| KRH12114 | Soybean | mitochondrion | 31.89 | 41.54 |
| CDY51444 | Canola | cytosol | 27.56 | 41.42 |
| Bra031280.1-P | Field mustard | cytosol | 27.56 | 41.42 |
| CDY48887 | Canola | mitochondrion | 30.32 | 40.31 |
| Bra001828.1-P | Field mustard | mitochondrion | 30.32 | 40.31 |
| KRH37123 | Soybean | mitochondrion | 29.53 | 39.27 |
Protein Annotations
| EnsemblPlants:Zm00001d023865_P001 | EnsemblPlants:Zm00001d023865_T001 | EnsemblPlantsGene:Zm00001d023865 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | ProteinID:AQK40277.1 | SEG:seg | UniParc:UPI0002209370 | UniProt:K7TNL9 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:25417359..25421335
Molecular Weight (calculated)
27516.7 Da
IEP (calculated)
11.247
GRAVY (calculated)
-0.961
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSVGTGRKP NTSRPKPPTK ARTRRGRPAR SPAASSLSLI HPQSPAVQRP PPARRRLWPE DRRYMGQALR RASGRVKPPP APSPPARQPH PPPPPPQASP
101: APAGGATQDR LDGLSGDDIT APTEHGHGVL EERDPSYDEM LKHMVGRITT KPGGKPEMGE ASVVQRYNRP LPKVRTSKAE PGQGGGRQLP SGALNVQHIQ
201: EIIRLYQGKS TNHQGPMSVD DIASRFGVEA SAVQNIVRFV SLPQDEGVEK KEEH
101: APAGGATQDR LDGLSGDDIT APTEHGHGVL EERDPSYDEM LKHMVGRITT KPGGKPEMGE ASVVQRYNRP LPKVRTSKAE PGQGGGRQLP SGALNVQHIQ
201: EIIRLYQGKS TNHQGPMSVD DIASRFGVEA SAVQNIVRFV SLPQDEGVEK KEEH
001: MGQQLRRAVG KIKEVERSSP SRVSIDRRSL PTEELSAVKS SPSTAAVDGV SDKGRRTSED NVLEERDPKY DTMLNQMVGR IKAKPGGKAE MGEASVVETS
101: KRPLPKLRNT TPESTRYEEN PVPQGTLNVA QVRHIMLLFQ GKSQDHHGPM GVNEIAEKYR IDVSQVQKIT QFLSLPQEIT DKQKKQYE
101: KRPLPKLRNT TPESTRYEEN PVPQGTLNVA QVRHIMLLFQ GKSQDHHGPM GVNEIAEKYR IDVSQVQKIT QFLSLPQEIT DKQKKQYE
Arabidopsis Description
Dynein beta chain, ciliary protein [Source:UniProtKB/TrEMBL;Acc:Q9LIF6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.