Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400058346 | Potato | mitochondrion | 90.35 | 56.59 |
| CDY55284 | Canola | nucleus | 64.91 | 41.81 |
| AT3G21400.1 | Thale cress | nucleus | 66.67 | 40.43 |
| VIT_05s0020g01370.t01 | Wine grape | mitochondrion, nucleus | 67.54 | 40.1 |
| Bra031280.1-P | Field mustard | cytosol | 57.02 | 38.46 |
| CDY51444 | Canola | cytosol | 57.02 | 38.46 |
| Bra001828.1-P | Field mustard | mitochondrion | 63.16 | 37.7 |
| CDY32427 | Canola | mitochondrion | 63.16 | 37.7 |
| CDY48887 | Canola | mitochondrion | 63.16 | 37.7 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.88 | 36.94 |
| KRH12114 | Soybean | mitochondrion | 61.4 | 35.9 |
| KRH37123 | Soybean | mitochondrion | 58.77 | 35.08 |
| TraesCS5B01G100200.1 | Wheat | mitochondrion | 55.26 | 32.81 |
| TraesCS5A01G094100.1 | Wheat | mitochondrion | 55.26 | 32.31 |
| EES16100 | Sorghum | plastid | 53.51 | 31.94 |
| Os12t0540700-01 | Rice | cytosol, mitochondrion, nucleus | 50.88 | 31.69 |
| Zm00001d023865_P001 | Maize | mitochondrion | 52.63 | 23.62 |
Protein Annotations
| EnsemblPlants:Solyc01g067080.2.1 | EnsemblPlantsGene:Solyc01g067080.2 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | PANTHER:PTHR36759 | UniParc:UPI0002762D52 | UniProt:K4AWV7 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr1:-:75411890..75413484
Molecular Weight (calculated)
12858.5 Da
IEP (calculated)
9.197
GRAVY (calculated)
-0.717
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSQMVGRIQ AKPGGKLEMG EATVVERYDR PLPKLRNTTS ESSRYEERPA PTGTLNVAQI KEILLLHQGR SDDHQGPMDI NGICERFRID AAQVQRILQF
101: VSLPPEDTSK KRNT
101: VSLPPEDTSK KRNT
001: MGQQLRRAVG KIKEVERSSP SRVSIDRRSL PTEELSAVKS SPSTAAVDGV SDKGRRTSED NVLEERDPKY DTMLNQMVGR IKAKPGGKAE MGEASVVETS
101: KRPLPKLRNT TPESTRYEEN PVPQGTLNVA QVRHIMLLFQ GKSQDHHGPM GVNEIAEKYR IDVSQVQKIT QFLSLPQEIT DKQKKQYE
101: KRPLPKLRNT TPESTRYEEN PVPQGTLNVA QVRHIMLLFQ GKSQDHHGPM GVNEIAEKYR IDVSQVQKIT QFLSLPQEIT DKQKKQYE
Arabidopsis Description
Dynein beta chain, ciliary protein [Source:UniProtKB/TrEMBL;Acc:Q9LIF6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.