CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12114	Soybean	mitochondrion	90.58	88.72
Solyc01g067080.2.1	Tomato	cytosol	35.08	58.77
VIT_05s0020g01370.t01	Wine grape	mitochondrion, nucleus	55.5	55.21
PGSC0003DMT400058346	Potato	mitochondrion	50.79	53.3
AT3G21400.1	Thale cress	nucleus	46.6	47.34
CDY55284	Canola	nucleus	42.41	45.76
Bra001828.1-P	Field mustard	mitochondrion	45.03	45.03
CDY32427	Canola	mitochondrion	45.03	45.03
CDY48887	Canola	mitochondrion	45.03	45.03
Bra031280.1-P	Field mustard	cytosol	37.17	42.01
CDY51444	Canola	cytosol	37.17	42.01
GSMUA_AchrUn_...	Banana	cytosol	34.03	41.4
EES16100	Sorghum	plastid	41.36	41.36
TraesCS5B01G100200.1	Wheat	mitochondrion	40.31	40.1
Os12t0540700-01	Rice	cytosol, mitochondrion, nucleus	38.22	39.89
TraesCS5A01G094100.1	Wheat	mitochondrion	40.31	39.49
Zm00001d023865_P001	Maize	mitochondrion	39.27	29.53

Protein Annotations

EMBL:ACUP02005418	EnsemblPlants:KRH37123	EnsemblPlantsGene:GLYMA_09G045900	EntrezGene:100806944	PANTHER:PTHR36759	ProteinID:KRH37123
ProteinID:KRH37123.1	SEG:seg	UniParc:UPI0002337E61	UniProt:I1L113	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr9:-:3933304..3936077

Molecular Weight (calculated)

21289.2 Da

IEP (calculated)

10.262

GRAVY (calculated)

-0.850

Length

191 amino acids

Sequence
(BLAST)

001: MGQAFRRASG RIRAASEADT SSFSKPKNAV DRRPPPNAAA DKAAQIPKAA EHDVLHANDS PRVNTDNILE ERDPKFDAML GQMIGRITSK PEMGEAFVVD
101: KYNRPMPKLR NTKPDSGRYD ERPVPAGTLN VAQLRHVILL HEGKADDYNG RMDAHQIAEK FRVDVVQIQR ILQFLSQPPE GSSKDKNKAP R

Best Arabidopsis Sequence Match ( AT3G21400.1 )
(BLAST)

001: MGQQLRRAVG KIKEVERSSP SRVSIDRRSL PTEELSAVKS SPSTAAVDGV SDKGRRTSED NVLEERDPKY DTMLNQMVGR IKAKPGGKAE MGEASVVETS
101: KRPLPKLRNT TPESTRYEEN PVPQGTLNVA QVRHIMLLFQ GKSQDHHGPM GVNEIAEKYR IDVSQVQKIT QFLSLPQEIT DKQKKQYE

Arabidopsis Description

Dynein beta chain, ciliary protein [Source:UniProtKB/TrEMBL;Acc:Q9LIF6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.