Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS5A01G094100.1 | |
| TraesCS5B01G100200.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G60150.1 | TraesCS5A01G094100.1 | AT3G21400.1 | 21798944 |
| AT3G60150.1 | TraesCS5B01G100200.1 | AT3G21400.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G216000.1 | Wheat | mitochondrion | 98.84 | 98.84 |
| TraesCS1B01G226600.1 | Wheat | mitochondrion | 98.84 | 98.84 |
| Os10t0571100-01 | Rice | mitochondrion | 55.49 | 79.34 |
| Os03t0590700-01 | Rice | cytosol | 31.79 | 77.46 |
| EER94458 | Sorghum | cytosol, plastid | 84.97 | 73.5 |
| Zm00001d047057_P001 | Maize | mitochondrion, plastid | 81.5 | 73.06 |
| KRH66350 | Soybean | mitochondrion | 68.79 | 68.39 |
| GSMUA_Achr1P00650_001 | Banana | cytosol | 72.25 | 66.49 |
| Solyc01g088350.2.1 | Tomato | mitochondrion | 65.9 | 66.28 |
| Zm00001d030019_P001 | Maize | mitochondrion | 80.35 | 66.19 |
| VIT_15s0021g00450.t01 | Wine grape | mitochondrion | 64.74 | 65.12 |
| AT3G60150.1 | Thale cress | mitochondrion | 63.01 | 64.12 |
| CDY47676 | Canola | mitochondrion | 62.43 | 63.53 |
| CDY42670 | Canola | mitochondrion | 59.54 | 63.19 |
| CDX89051 | Canola | mitochondrion | 59.54 | 63.19 |
| Bra014509.1-P | Field mustard | mitochondrion | 59.54 | 63.19 |
| CDX74663 | Canola | mitochondrion | 61.85 | 62.94 |
| Bra004843.1-P | Field mustard | mitochondrion | 61.85 | 62.94 |
| AT2G44525.1 | Thale cress | mitochondrion | 61.27 | 62.35 |
| CDX74665 | Canola | cytosol | 30.64 | 51.96 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G213100.1 | EnsemblPlantsGene:TraesCS1A01G213100 | Gene3D:3.40.1230.10 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0032981 | InterPro:IPR036748 | InterPro:MTH938-like_sf | InterPro:NDUF3 | InterPro:NDUFAF3/AAMDC | PANTHER:PTHR21192 |
| PANTHER:PTHR21192:SF2 | PFAM:PF04430 | SUPFAM:SSF64076 | TIGR:cd05125 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr1A:-:376509215..376512887
Molecular Weight (calculated)
19256.2 Da
IEP (calculated)
9.422
GRAVY (calculated)
-0.113
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAARGQKAL ATLVRSLRSD SISNSNAPRL RHLPSLRRTF SLYDQINLID TVPEDQLRFQ TYDDTGFKIN NVKYEGSLLI VENKIMTWTP KTFADITAES
101: LSIFKIVHPI PEILILGCGK YVQPVSPELR KFIRSTGMKL EAIDSRNAAS TYNILNEEGR AVAAAVLPFG VDS
101: LSIFKIVHPI PEILILGCGK YVQPVSPELR KFIRSTGMKL EAIDSRNAAS TYNILNEEGR AVAAAVLPFG VDS
001: MAVRQKAMAT LPKLIQSMRN EVTKQPSLVL PSLRRAFSLY DQINLIDNVP EDQLRFQEFD ETSFTVNGVK YEGSLLCVGN LLMSWSPRYF SDITTDSLSI
101: FQTVRPIPEL LIVGCGRYNH PLNPQVRQFV KSIGMKLETV DSRNAASTYN ILNEEGRIVA AALLPYGVTS
101: FQTVRPIPEL LIVGCGRYNH PLNPQVRQFV KSIGMKLETV DSRNAASTYN ILNEEGRIVA AALLPYGVTS
Arabidopsis Description
NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598) [Source:UniProtKB/TrEMBL;Acc:Q682I4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.