Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0590700-01 | Rice | cytosol | 45.1 | 64.79 |
| CDY47676 | Canola | mitochondrion | 72.55 | 43.53 |
| CDX74663 | Canola | mitochondrion | 70.59 | 42.35 |
| AT2G44525.1 | Thale cress | mitochondrion | 70.59 | 42.35 |
| CDY42670 | Canola | mitochondrion | 66.67 | 41.72 |
| CDX89051 | Canola | mitochondrion | 65.69 | 41.1 |
| Solyc01g088350.2.1 | Tomato | mitochondrion | 57.84 | 34.3 |
| KRH66350 | Soybean | mitochondrion | 57.84 | 33.91 |
| VIT_15s0021g00450.t01 | Wine grape | mitochondrion | 55.88 | 33.14 |
| TraesCS1A01G213100.1 | Wheat | mitochondrion | 51.96 | 30.64 |
| TraesCS1B01G226600.1 | Wheat | mitochondrion | 51.96 | 30.64 |
| TraesCS1D01G216000.1 | Wheat | mitochondrion | 51.96 | 30.64 |
| GSMUA_Achr1P00650_001 | Banana | cytosol | 54.9 | 29.79 |
| Zm00001d047057_P001 | Maize | mitochondrion, plastid | 53.92 | 28.5 |
| EER94458 | Sorghum | cytosol, plastid | 53.92 | 27.5 |
| Zm00001d030019_P001 | Maize | mitochondrion | 51.96 | 25.24 |
| Os10t0571100-01 | Rice | mitochondrion | 11.76 | 9.92 |
Protein Annotations
| EnsemblPlants:CDX74665 | EnsemblPlantsGene:GSBRNA2T00116615001 | Gene3D:3.40.1230.10 | InterPro:IPR036748 | InterPro:MTH938-like_sf | InterPro:NDUFAF3/AAMDC |
| PANTHER:PTHR21192 | PANTHER:PTHR21192:SF2 | PFAM:PF04430 | ProteinID:CDX74665 | ProteinID:CDX74665.1 | SUPFAM:SSF64076 |
| UniParc:UPI0004EDE40D | MapMan:35.2 | : | : | : | : |
Description
BnaA05g04110D
Coordinates
chrLK031802:+:85044..86263
Molecular Weight (calculated)
11278.5 Da
IEP (calculated)
7.519
GRAVY (calculated)
-0.123
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIQDSNITS NSNTRVQRDE FHTKITPVSL PIFQTVRPIP ELLIVGCGRN IHPVTPEVRQ FVKSIDMKLE TVDSRNAAST YNILNEEGRV VAAALLPYGV
101: AS
101: AS
001: MAMRLKSMAT LPKLIQSMRK EVPKHSNPVL PSLRRAFSLY DQINLIDNVP EDQLRFQEFN DTSFTVNGVK YEGSLLCVGN LLMSWSPRKF SEITTDSLSI
101: FQTVRPIPEL LIVGCGRDIH PVTPEVRQFV KSLGMKLETV DSRNAASTYN ILNEEGRVVA AALLPYGVTS
101: FQTVRPIPEL LIVGCGRDIH PVTPEVRQFV KSLGMKLETV DSRNAASTYN ILNEEGRVVA AALLPYGVTS
Arabidopsis Description
At2g44525 [Source:UniProtKB/TrEMBL;Acc:Q8RUX8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.