Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
- plasma membrane 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os12t0540700-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G60150.1 | Os12t0540700-01 | AT3G21400.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G216000.1 | Wheat | mitochondrion | 80.17 | 56.07 |
| TraesCS1A01G213100.1 | Wheat | mitochondrion | 79.34 | 55.49 |
| TraesCS1B01G226600.1 | Wheat | mitochondrion | 78.51 | 54.91 |
| EER94458 | Sorghum | cytosol, plastid | 83.47 | 50.5 |
| Zm00001d047057_P001 | Maize | mitochondrion, plastid | 80.17 | 50.26 |
| Zm00001d030019_P001 | Maize | mitochondrion | 76.03 | 43.81 |
| KRH66350 | Soybean | mitochondrion | 61.16 | 42.53 |
| AT3G60150.1 | Thale cress | mitochondrion | 57.02 | 40.59 |
| GSMUA_Achr1P00650_001 | Banana | cytosol | 62.81 | 40.43 |
| VIT_15s0021g00450.t01 | Wine grape | mitochondrion | 57.02 | 40.12 |
| CDX89051 | Canola | mitochondrion | 53.72 | 39.88 |
| Bra014509.1-P | Field mustard | mitochondrion | 53.72 | 39.88 |
| AT2G44525.1 | Thale cress | mitochondrion | 55.37 | 39.41 |
| CDY42670 | Canola | mitochondrion | 52.07 | 38.65 |
| CDY47676 | Canola | mitochondrion | 53.72 | 38.24 |
| CDX74663 | Canola | mitochondrion | 52.89 | 37.65 |
| Bra004843.1-P | Field mustard | mitochondrion | 52.89 | 37.65 |
| Solyc01g088350.2.1 | Tomato | mitochondrion | 51.24 | 36.05 |
| CDX74665 | Canola | cytosol | 9.92 | 11.76 |
| Os03t0590700-01 | Rice | cytosol | 5.79 | 9.86 |
Protein Annotations
| EnsemblPlants:Os10t0571100-01 | EnsemblPlantsGene:Os10g0571100 | Gene3D:3.40.1230.10 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0032981 | InterPro:IPR036748 | InterPro:MTH938-like_sf | InterPro:NDUFAF3/AAMDC | PANTHER:PTHR21192 | PANTHER:PTHR21192:SF2 |
| PFAM:PF04430 | ProteinID:ABG66279.1 | ProteinID:BAF27290.1 | ProteinID:BAT12157.1 | SUPFAM:SSF64076 | UniParc:UPI0000DB4F88 |
| UniProt:Q108W6 | MapMan:35.2 | : | : | : | : |
Description
Protein of unknown function DUF498 domain containing protein. (Os10t0571100-01)
Coordinates
chr10:+:22636085..22640104
Molecular Weight (calculated)
13517.3 Da
IEP (calculated)
9.926
GRAVY (calculated)
-0.169
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAARGQKAV AALPHLVKSL RSEPVSNAPR LRHLPSLRRT FSLYDQINLI DSVPEDQLRF QSYDDTGFNI NKVKYEGSLL IVENKIMTWA PKSFAEITAE
101: SLSIFKVVHP IPGNSAIGQH F
101: SLSIFKVVHP IPGNSAIGQH F
001: MAVRQKAMAT LPKLIQSMRN EVTKQPSLVL PSLRRAFSLY DQINLIDNVP EDQLRFQEFD ETSFTVNGVK YEGSLLCVGN LLMSWSPRYF SDITTDSLSI
101: FQTVRPIPEL LIVGCGRYNH PLNPQVRQFV KSIGMKLETV DSKCCINLQH TQ
101: FQTVRPIPEL LIVGCGRYNH PLNPQVRQFV KSIGMKLETV DSKCCINLQH TQ
Arabidopsis Description
NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598) [Source:UniProtKB/TrEMBL;Acc:Q682I4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.