Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 5
- plasma membrane 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra001828.1-P | |
| Bra031280.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G60150.1 | Bra001828.1-P | AT3G21400.1 | 21798944 |
| AT3G60150.1 | Bra031280.1-P | AT3G21400.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89051 | Canola | mitochondrion | 99.39 | 99.39 |
| AT3G60150.1 | Thale cress | mitochondrion | 90.18 | 86.47 |
| Bra004843.1-P | Field mustard | mitochondrion | 86.5 | 82.94 |
| Solyc01g088350.2.1 | Tomato | mitochondrion | 71.17 | 67.44 |
| VIT_15s0021g00450.t01 | Wine grape | mitochondrion | 70.55 | 66.86 |
| KRH66350 | Soybean | mitochondrion | 70.55 | 66.09 |
| Os03t0590700-01 | Rice | cytosol | 28.22 | 64.79 |
| TraesCS1D01G216000.1 | Wheat | mitochondrion | 63.8 | 60.12 |
| TraesCS1A01G213100.1 | Wheat | mitochondrion | 63.19 | 59.54 |
| TraesCS1B01G226600.1 | Wheat | mitochondrion | 63.19 | 59.54 |
| GSMUA_Achr1P00650_001 | Banana | cytosol | 66.87 | 57.98 |
| Os10t0571100-01 | Rice | mitochondrion | 39.88 | 53.72 |
| Zm00001d047057_P001 | Maize | mitochondrion, plastid | 63.19 | 53.37 |
| EER94458 | Sorghum | cytosol, plastid | 63.19 | 51.5 |
| Zm00001d030019_P001 | Maize | mitochondrion | 59.51 | 46.19 |
Protein Annotations
| EnsemblPlants:Bra014509.1 | EnsemblPlants:Bra014509.1-P | EnsemblPlantsGene:Bra014509 | Gene3D:3.40.1230.10 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0032981 | InterPro:IPR036748 | InterPro:MTH938-like_sf | InterPro:NDUF3 | InterPro:NDUFAF3/AAMDC |
| PANTHER:PTHR21192 | PANTHER:PTHR21192:SF2 | PFAM:PF04430 | SUPFAM:SSF64076 | UniParc:UPI0002543DE0 | UniProt:M4DDE1 |
| MapMan:35.2 | : | : | : | : | : |
Description
AT3G60150 (E=1e-081) | unknown protein
Coordinates
chrA04:-:1083994..1085007
Molecular Weight (calculated)
18339.1 Da
IEP (calculated)
7.604
GRAVY (calculated)
-0.147
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLPKLIRA MRNESPKHHN LVLPSLRRAF SLYDQINLID NVPEDQLRFQ EFDETSFTVN GVKYDGSLLS VGNLLMSWSP RSFSEITTDS LSIFQTVRPI
101: PELLIIGCGR YNHPVNPQVR QFVKSIGMKL ETLDSRNAAS TYNILNEEGR IVAAALLPYG VTS
101: PELLIIGCGR YNHPVNPQVR QFVKSIGMKL ETLDSRNAAS TYNILNEEGR IVAAALLPYG VTS
001: MAVRQKAMAT LPKLIQSMRN EVTKQPSLVL PSLRRAFSLY DQINLIDNVP EDQLRFQEFD ETSFTVNGVK YEGSLLCVGN LLMSWSPRYF SDITTDSLSI
101: FQTVRPIPEL LIVGCGRYNH PLNPQVRQFV KSIGMKLETV DSRNAASTYN ILNEEGRIVA AALLPYGVTS
101: FQTVRPIPEL LIVGCGRYNH PLNPQVRQFV KSIGMKLETV DSRNAASTYN ILNEEGRIVA AALLPYGVTS
Arabidopsis Description
NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598) [Source:UniProtKB/TrEMBL;Acc:Q682I4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.