CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH07953
KRH24006
KRH27971
KRH29310
KRH66350
KRH69706
KRH77487

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31780.1	KRH24006	AT3G48150.1	21798944
AT1G31780.1	KRH27971	AT3G48150.1	21798944
AT1G31780.1	KRH29310	AT3G48150.1	21798944
AT1G31780.1	KRH77487	AT3G48150.1	21798944
AT1G31780.1	KRH66350	AT3G60150.1	21798944
AT1G31780.1	KRH07953	AT5G11980.1	21798944
AT1G31780.1	KRH69706	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90345	Soybean	cytosol	10.07	65.15
KRH28986	Soybean	cytosol, mitochondrion, nucleus	94.15	58.01
VIT_02s0012g00920.t01	Wine grape	mitochondrion	78.22	48.41
Solyc08g075440.2.1	Tomato	plastid	75.88	46.89
AT1G31780.1	Thale cress	cytosol	73.07	45.88
PGSC0003DMT400004938	Potato	cytosol	53.86	45.19
GSMUA_Achr8P14460_001	Banana	mitochondrion	74.24	45.16
TraesCS4A01G062100.1	Wheat	mitochondrion	72.83	45.14
TraesCS4D01G248500.1	Wheat	mitochondrion	72.83	45.14
Bra023203.1-P	Field mustard	plastid	71.9	45.08
CDY49154	Canola	plastid	71.9	45.08
HORVU4Hr1G066300.1	Barley	mitochondrion	72.6	44.99
TraesCS4B01G238800.2	Wheat	mitochondrion	72.6	44.99
CDY12296	Canola	plastid	71.66	44.93
OQU92971	Sorghum	mitochondrion	72.13	44.9
Zm00001d028279_P001	Maize	mitochondrion	72.13	43.56
Zm00001d048022_P001	Maize	cytosol	0.94	3.67
Os03t0225600-01	Rice	cytosol	0.7	2.63

Protein Annotations

EMBL:ACUP02000615	EnsemblPlants:KRH76471	EnsemblPlantsGene:GLYMA_01G154500	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006891	GO:GO:0008150	GO:GO:0017119
InterPro:COG6	PANTHER:PTHR21506	PFAM:PF06419	ProteinID:KRH76471	ProteinID:KRH76471.1	SEG:seg
SMART:SM01087	UniParc:UPI0006EDEB2A	UniProt:A0A0R0LBB8	MapMan:22.6.2.6	:	:

Description

hypothetical protein

Coordinates

chr1:+:49196311..49201478

Molecular Weight (calculated)

47316.6 Da

IEP (calculated)

6.581

GRAVY (calculated)

-0.170

Length

427 amino acids

Sequence
(BLAST)

001: MGTSVADLAP GLSRKLKKVQ ESRIDTPYLL SSLNTLSSFY DDNTPQARRN LRSTIEKRAL SINCEFLDAS HAAQLINALR EEELNENFFK ALSHVQEIHA
101: NCKVLLRTHH QRAGLELMDM MAVYQEGAYE RLCRERSVLF KYCAEEVANM RHNALFRRFI SALTRGGPGG LPRPIEVHAH DPLRYVGDML GWLHQALASE
201: RELVAVLLDP DTITDSGPKQ FSNNSEDGSG KTESDLMFVL DRIFEGSQPS LIVSYKLSST LEFYCYTISD LLGRETALCN TLWALKDAAQ NTFFDILKGR
301: GEKLLRYPPL VAVDLSPPPA VTEGVSVLLE IIDNYNSMMV PASGQKPAFG PVISAILDPI VQMCEQAAEA HKSKGAGHSS RRSGMSFDCG QLTKSSVDAI
401: LSNSSSVSSS LVCSYSFSLK FYRYLLP

Best Arabidopsis Sequence Match ( AT1G31780.1 )
(BLAST)

001: MASTVGLAPG LSRKLKKVLD CRTDSPDLVA SLNALSSFYD ENSAHARRNL RSTIEKRALQ INSEFLNAAD STQIALDRVE EEVNALADCC DKIAAALSSS
101: AATTSDIIST TERLKQELEV TTQRQEIVNC FLRDYQLSNE EIKALREDEL NENFFQALSH VQEIHSNCKL LLRTHHQRAG LELMDMMAVY QEGAYERLCR
201: WVQAECRKLG DTDNPEVSEL LRTAVRCLKE RPVLFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADH QSNAKNTSEN IALKAGESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA VDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKKSGQLPRR SRTSSDSSQL
501: TSVDALLSSS PSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG LMIENHINLL VQNEVDTLLH KCGLSDKMQI FRSSTSELPL SERQDTSPAM
601: LSECLKAFFG LVLGSEGSLP EFEQIQVPKL RSEACVRVAK TLAEAYEVIY QAVTDQQNGY PDPKSLARHP PDQIRTILGI

Arabidopsis Description

At1g31780 [Source:UniProtKB/TrEMBL;Acc:Q6NMI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.