Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76471 | Soybean | cytosol, mitochondrion, nucleus | 58.01 | 94.15 |
| VIT_02s0012g00920.t01 | Wine grape | mitochondrion | 80.81 | 81.16 |
| Solyc08g075440.2.1 | Tomato | plastid | 76.48 | 76.7 |
| PGSC0003DMT400004938 | Potato | cytosol | 55.84 | 76.03 |
| AT1G31780.1 | Thale cress | cytosol | 74.03 | 75.44 |
| Bra023203.1-P | Field mustard | plastid | 72.44 | 73.72 |
| CDY49154 | Canola | plastid | 72.44 | 73.72 |
| CDY12296 | Canola | plastid | 72.01 | 73.27 |
| TraesCS4D01G248500.1 | Wheat | mitochondrion | 71.72 | 72.13 |
| OQU92971 | Sorghum | mitochondrion | 71.14 | 71.87 |
| TraesCS4A01G062100.1 | Wheat | mitochondrion | 71.43 | 71.84 |
| TraesCS4B01G238800.2 | Wheat | mitochondrion | 71.43 | 71.84 |
| HORVU4Hr1G066300.1 | Barley | mitochondrion | 71.43 | 71.84 |
| GSMUA_Achr8P14460_001 | Banana | mitochondrion | 72.01 | 71.08 |
| Zm00001d028279_P001 | Maize | mitochondrion | 71.14 | 69.73 |
| KRG90345 | Soybean | cytosol | 6.49 | 68.18 |
| Os03t0225600-01 | Rice | cytosol | 10.1 | 61.4 |
| Zm00001d048022_P001 | Maize | cytosol | 8.08 | 51.38 |
Protein Annotations
| EMBL:ACUP02006776 | EnsemblPlants:KRH28986 | EnsemblPlantsGene:GLYMA_11G090100 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006891 | GO:GO:0008150 | GO:GO:0017119 |
| InterPro:COG6 | PANTHER:PTHR21506 | PFAM:PF06419 | ProteinID:KRH28986 | ProteinID:KRH28986.1 | SEG:seg |
| SMART:SM01087 | UniParc:UPI000233C527 | UniProt:A0A0R0HER9 | MapMan:22.6.2.6 | : | : |
Description
hypothetical protein
Coordinates
chr11:-:6813478..6819800
Molecular Weight (calculated)
76795.9 Da
IEP (calculated)
5.800
GRAVY (calculated)
-0.236
Length
693 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTTVAGLAP GLSRKLKKVL ESRIDTPDLL SSLNTLSSFY DDNTPQARRN LRSTIEKRAL SINREFLDAS HAAQLALDSV ENEVDALAEC CDRIAKALNS
101: CSASTADIIG TTERLKQELE TTTQRQEIVA CFLRDYQLSP EEINALREEE LNENFFKALS HVQEIHANCK VLLRTHHQRA GLELMDMMAV YQEGAYERLC
201: RWVQAECRKL GDTDNPEVSE LLKTAVRYLR ERSVLFKYCA EEVANMRHNA LFRRFISALT RGGPGGLPRP IEVHAHDPLR YVGDMLGWLH QALASERELV
301: AVLLDPDTIT DSGPKQFSNN SENGSGKTES DLMFVLDRIF EGVCRPFKLR VEQVLQSQPS LIVSYKLSST LEFYCYTISD LLGRETALCN TLWALKDAAQ
401: KTFFDILKGR GEKLLRYPPL VAVDLSPPPA VREGVSVLLE VIDNYNSMMV PASGQKPAFG PVISAILDPI VQMCEQAAEA HKSKGAGHSS RRSRMSSDSG
501: QLTKSSVDAI LSNSSSASSS LTSETPSKIF LINCLCAIQQ PLSGYEAVAD YVKRLGAMID NHLCVLVEKE ADAILRRCNL SEKMPHFQNS IHKEGDNEVG
601: TPLAEMEDTS PAVLSECLKA LFGLILGSES SLPEFEQMQV PRLRSEATIG VARSLAEAYD LIYKAIMDPK NGYPDPRSLA RHPPNQIRTI LGI
101: CSASTADIIG TTERLKQELE TTTQRQEIVA CFLRDYQLSP EEINALREEE LNENFFKALS HVQEIHANCK VLLRTHHQRA GLELMDMMAV YQEGAYERLC
201: RWVQAECRKL GDTDNPEVSE LLKTAVRYLR ERSVLFKYCA EEVANMRHNA LFRRFISALT RGGPGGLPRP IEVHAHDPLR YVGDMLGWLH QALASERELV
301: AVLLDPDTIT DSGPKQFSNN SENGSGKTES DLMFVLDRIF EGVCRPFKLR VEQVLQSQPS LIVSYKLSST LEFYCYTISD LLGRETALCN TLWALKDAAQ
401: KTFFDILKGR GEKLLRYPPL VAVDLSPPPA VREGVSVLLE VIDNYNSMMV PASGQKPAFG PVISAILDPI VQMCEQAAEA HKSKGAGHSS RRSRMSSDSG
501: QLTKSSVDAI LSNSSSASSS LTSETPSKIF LINCLCAIQQ PLSGYEAVAD YVKRLGAMID NHLCVLVEKE ADAILRRCNL SEKMPHFQNS IHKEGDNEVG
601: TPLAEMEDTS PAVLSECLKA LFGLILGSES SLPEFEQMQV PRLRSEATIG VARSLAEAYD LIYKAIMDPK NGYPDPRSLA RHPPNQIRTI LGI
001: MASTVGLAPG LSRKLKKVLD CRTDSPDLVA SLNALSSFYD ENSAHARRNL RSTIEKRALQ INSEFLNAAD STQIALDRVE EEVNALADCC DKIAAALSSS
101: AATTSDIIST TERLKQELEV TTQRQEIVNC FLRDYQLSNE EIKALREDEL NENFFQALSH VQEIHSNCKL LLRTHHQRAG LELMDMMAVY QEGAYERLCR
201: WVQAECRKLG DTDNPEVSEL LRTAVRCLKE RPVLFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADH QSNAKNTSEN IALKAGESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA VDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKKSGQLPRR SRTSSDSSQL
501: TSVDALLSSS PSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG LMIENHINLL VQNEVDTLLH KCGLSDKMQI FRSSTSELPL SERQDTSPAM
601: LSECLKAFFG LVLGSEGSLP EFEQIQVPKL RSEACVRVAK TLAEAYEVIY QAVTDQQNGY PDPKSLARHP PDQIRTILGI
101: AATTSDIIST TERLKQELEV TTQRQEIVNC FLRDYQLSNE EIKALREDEL NENFFQALSH VQEIHSNCKL LLRTHHQRAG LELMDMMAVY QEGAYERLCR
201: WVQAECRKLG DTDNPEVSEL LRTAVRCLKE RPVLFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADH QSNAKNTSEN IALKAGESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA VDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKKSGQLPRR SRTSSDSSQL
501: TSVDALLSSS PSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG LMIENHINLL VQNEVDTLLH KCGLSDKMQI FRSSTSELPL SERQDTSPAM
601: LSECLKAFFG LVLGSEGSLP EFEQIQVPKL RSEACVRVAK TLAEAYEVIY QAVTDQQNGY PDPKSLARHP PDQIRTILGI
Arabidopsis Description
At1g31780 [Source:UniProtKB/TrEMBL;Acc:Q6NMI3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.