Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- endoplasmic reticulum 1
- cytosol 4
- mitochondrion 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400017657 | |
| PGSC0003DMT400063189 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G31780.1 | PGSC0003DMT400063189 | AT3G48150.1 | 21798944 |
| AT1G31780.1 | PGSC0003DMT400017657 | AT5G11980.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g075440.2.1 | Tomato | plastid | 97.25 | 71.64 |
| VIT_02s0012g00920.t01 | Wine grape | mitochondrion | 79.17 | 58.41 |
| KRH28986 | Soybean | cytosol, mitochondrion, nucleus | 76.03 | 55.84 |
| AT1G31780.1 | Thale cress | cytosol | 72.5 | 54.26 |
| KRH76471 | Soybean | cytosol, mitochondrion, nucleus | 45.19 | 53.86 |
| Bra023203.1-P | Field mustard | plastid | 71.71 | 53.6 |
| CDY49154 | Canola | plastid | 71.71 | 53.6 |
| CDY12296 | Canola | plastid | 71.32 | 53.3 |
| Os03t0225600-01 | Rice | cytosol | 11.59 | 51.75 |
| OQU92971 | Sorghum | mitochondrion | 67.39 | 50.0 |
| TraesCS4B01G238800.2 | Wheat | mitochondrion | 66.99 | 49.49 |
| TraesCS4D01G248500.1 | Wheat | mitochondrion | 66.99 | 49.49 |
| TraesCS4A01G062100.1 | Wheat | mitochondrion | 66.8 | 49.35 |
| HORVU4Hr1G066300.1 | Barley | mitochondrion | 66.4 | 49.06 |
| Zm00001d048022_P001 | Maize | cytosol | 10.41 | 48.62 |
| GSMUA_Achr8P14460_001 | Banana | mitochondrion | 66.6 | 48.29 |
| Zm00001d028279_P001 | Maize | mitochondrion | 66.6 | 47.95 |
| KRG90345 | Soybean | cytosol | 0.2 | 1.52 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400004938 | EnsemblPlantsGene:PGSC0003DMG400001956 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006891 | GO:GO:0008150 | GO:GO:0017119 | InterPro:COG6 |
| PANTHER:PTHR21506 | PFAM:PF06419 | PGSC:PGSC0003DMG400001956 | SEG:seg | SMART:SM01087 | UniParc:UPI0002958A58 |
| UniProt:M0ZP85 | MapMan:22.6.2.6 | : | : | : | : |
Description
Component of oligomeric golgi complex [Source:PGSC_GENE;Acc:PGSC0003DMG400001956]
Coordinates
chr8:+:47312341..47320109
Molecular Weight (calculated)
56988.7 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.226
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMYQEGAYE RLCRWVQTEC RRLGDVDNPE VGELLRTAVR CLKERPVLFK YCAEEVANMR HNALFRRFIS ALTRGGPGGL PRPIEVHAHD PLRYVGDMLG
101: WLHQALASER ELVLALLDPD ASDTRSTNHN YSKRVDSESE KTESDLTFVL DRIFEGVCRP FKVRVEQVLH SQPNLIISYK LSNTLEFYFY TISDLLGIET
201: SLCNTLLVLK EAAQKTFFDI LKGRGEKLLR YPPLVAVDLS PPPALREGVS LLLEIIQTHD SMMFPASGKK PDFDPVISAL LDPIIQMCEQ AAEAHKSKGS
301: MHSSRRNRIT SDPSQHRRSS VDALLDGSNS APLPQTSETP AKIFLINCLC AIQQPLLGHE VASGYVKKLG VMIDNHINAL VEKEVEAILR RCGLLTKMSH
401: FRKSLEINES SNSIARTPLA EQEDTSPVSV AESLKALFGL ILGSETAIPE FEQMQVPRLR SETSVQVARS LAEAYELIYR AIMDPENGYT DPKSLARHPP
501: DQIRTILGI
101: WLHQALASER ELVLALLDPD ASDTRSTNHN YSKRVDSESE KTESDLTFVL DRIFEGVCRP FKVRVEQVLH SQPNLIISYK LSNTLEFYFY TISDLLGIET
201: SLCNTLLVLK EAAQKTFFDI LKGRGEKLLR YPPLVAVDLS PPPALREGVS LLLEIIQTHD SMMFPASGKK PDFDPVISAL LDPIIQMCEQ AAEAHKSKGS
301: MHSSRRNRIT SDPSQHRRSS VDALLDGSNS APLPQTSETP AKIFLINCLC AIQQPLLGHE VASGYVKKLG VMIDNHINAL VEKEVEAILR RCGLLTKMSH
401: FRKSLEINES SNSIARTPLA EQEDTSPVSV AESLKALFGL ILGSETAIPE FEQMQVPRLR SETSVQVARS LAEAYELIYR AIMDPENGYT DPKSLARHPP
501: DQIRTILGI
001: MASTVGLAPG LSRKLKKVLD CRTDSPDLVA SLNALSSFYD ENSAHARRNL RSTIEKRALQ INSEFLNAAD STQIALDRVE EEVNALADCC DKIAAALSSS
101: AATTSDIIST TERLKQELEV TTQRQEIVNC FLRDYQLSNE EIKALREDEL NENFFQALSH VQEIHSNCKL LLRTHHQRAG LELMDMMAVY QEGAYERLCR
201: WVQAECRKLG DTDNPEVSEL LRTAVRCLKE RPVLFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADH QSNAKNTSEN IALKAGESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA VDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKKSGQLPRR SRTSSDSSQL
501: TSVDALLSSS PSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG LMIENHINLL VQNEVDTLLH KCGLSDKMQI FRSSTSELPL SERQDTSPAM
601: LSECLKAFFG LVLGSEGSLP EFEQIQVPKL RSEACVRVAK TLAEAYEVIY QAVTDQQNGY PDPKSLARHP PDQIRTILGI
101: AATTSDIIST TERLKQELEV TTQRQEIVNC FLRDYQLSNE EIKALREDEL NENFFQALSH VQEIHSNCKL LLRTHHQRAG LELMDMMAVY QEGAYERLCR
201: WVQAECRKLG DTDNPEVSEL LRTAVRCLKE RPVLFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADH QSNAKNTSEN IALKAGESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA VDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKKSGQLPRR SRTSSDSSQL
501: TSVDALLSSS PSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG LMIENHINLL VQNEVDTLLH KCGLSDKMQI FRSSTSELPL SERQDTSPAM
601: LSECLKAFFG LVLGSEGSLP EFEQIQVPKL RSEACVRVAK TLAEAYEVIY QAVTDQQNGY PDPKSLARHP PDQIRTILGI
Arabidopsis Description
At1g31780 [Source:UniProtKB/TrEMBL;Acc:Q6NMI3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.