Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU92971 | Sorghum | mitochondrion | 94.63 | 97.52 |
| TraesCS4A01G062100.1 | Wheat | mitochondrion | 86.42 | 88.68 |
| TraesCS4D01G248500.1 | Wheat | mitochondrion | 86.28 | 88.53 |
| HORVU4Hr1G066300.1 | Barley | mitochondrion | 86.14 | 88.39 |
| TraesCS4B01G238800.2 | Wheat | mitochondrion | 86.0 | 88.24 |
| Os03t0225600-01 | Rice | cytosol | 14.0 | 86.84 |
| Zm00001d048022_P001 | Maize | cytosol | 12.87 | 83.49 |
| GSMUA_Achr8P14460_001 | Banana | mitochondrion | 71.99 | 72.51 |
| KRH76471 | Soybean | cytosol, mitochondrion, nucleus | 43.56 | 72.13 |
| KRH28986 | Soybean | cytosol, mitochondrion, nucleus | 69.73 | 71.14 |
| AT1G31780.1 | Thale cress | cytosol | 67.04 | 69.71 |
| VIT_02s0012g00920.t01 | Wine grape | mitochondrion | 67.75 | 69.42 |
| CDY49154 | Canola | plastid | 66.05 | 68.58 |
| Bra023203.1-P | Field mustard | plastid | 66.05 | 68.58 |
| CDY12296 | Canola | plastid | 65.63 | 68.14 |
| Solyc08g075440.2.1 | Tomato | plastid | 66.2 | 67.73 |
| PGSC0003DMT400004938 | Potato | cytosol | 47.95 | 66.6 |
| KRG90345 | Soybean | cytosol | 5.66 | 60.61 |
Protein Annotations
| EnsemblPlants:Zm00001d028279_P001 | EnsemblPlants:Zm00001d028279_T001 | EnsemblPlantsGene:Zm00001d028279 | EntrezGene:100382195 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006891 | GO:GO:0008150 |
| GO:GO:0017119 | InterPro:COG6 | PANTHER:PTHR21506 | PFAM:PF06419 | ProteinID:ONL95353.1 | SEG:seg |
| SMART:SM01087 | UniParc:UPI0008459C85 | UniProt:A0A1D6JU54 | MapMan:22.6.2.6 | : | : |
Description
No Description!
Coordinates
chr1:+:28996699..29002980
Molecular Weight (calculated)
79053.0 Da
IEP (calculated)
5.945
GRAVY (calculated)
-0.204
Length
707 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAALAPGVS RKLKKVLETR TDNPDLLASL GALSTFYVQN TPQARRNLKS SIEQRALAIN RHFLDASLPA HKALDRVEGE VHALNDSWKK IEEALNSCSA
101: STGDIISTTE RLQQELEVIT QRQEIVSCFL RDYQLSNEEI NALREEEIDD KFFKALLHVQ EIHSNCKVLL RTHHQLVSLS NDIKCLYKMF FFLYSQRAGL
201: ELMDMMSVYQ EGAYERLCRW VQAECKKLGD TDNPEVSELL KMAVCCLKER PVLFKYCAEE VANMRHHALF RRFISALTRG GPGGFPRPIE VHAHDPLRYV
301: GEMLGWLHQA LASERELIVV LLDPDAMTDS GPTFRRQSGR DGDSSKGEPD VTSVLDRIFE GACRPFKVRV EQVLQSQPSL IVSFKLSNTL EFYCYTISEL
401: LGEDTALCNT IWSLRDAAQQ TFFNILKSRG EKLLRYPPLV AVDLSPPPAV REGISLLLEL IDTYNSMMVP ASGKRPNFDP VISALLDPII QVCEQAAEAQ
501: KSKGSLARRG RTSSDPSGNS RDSISVDAIL SKNLSTSILS AESSSKVYLI NCLSAIQEPL MGQEVATSYV NNLRSMIEAH ICVLVDKEVD CILRKCGLSN
601: KMPYIKEYGS KADARPLADI IETSPQMLME CLKAFYGIVT GTEGSLPEFE QLQVPRLRSD ACNGLARALA ESYELIYSAV MDPNNSYPDP RSLVKHSPEQ
701: IRTILEA
101: STGDIISTTE RLQQELEVIT QRQEIVSCFL RDYQLSNEEI NALREEEIDD KFFKALLHVQ EIHSNCKVLL RTHHQLVSLS NDIKCLYKMF FFLYSQRAGL
201: ELMDMMSVYQ EGAYERLCRW VQAECKKLGD TDNPEVSELL KMAVCCLKER PVLFKYCAEE VANMRHHALF RRFISALTRG GPGGFPRPIE VHAHDPLRYV
301: GEMLGWLHQA LASERELIVV LLDPDAMTDS GPTFRRQSGR DGDSSKGEPD VTSVLDRIFE GACRPFKVRV EQVLQSQPSL IVSFKLSNTL EFYCYTISEL
401: LGEDTALCNT IWSLRDAAQQ TFFNILKSRG EKLLRYPPLV AVDLSPPPAV REGISLLLEL IDTYNSMMVP ASGKRPNFDP VISALLDPII QVCEQAAEAQ
501: KSKGSLARRG RTSSDPSGNS RDSISVDAIL SKNLSTSILS AESSSKVYLI NCLSAIQEPL MGQEVATSYV NNLRSMIEAH ICVLVDKEVD CILRKCGLSN
601: KMPYIKEYGS KADARPLADI IETSPQMLME CLKAFYGIVT GTEGSLPEFE QLQVPRLRSD ACNGLARALA ESYELIYSAV MDPNNSYPDP RSLVKHSPEQ
701: IRTILEA
001: MASTVGLAPG LSRKLKKVLD CRTDSPDLVA SLNALSSFYD ENSAHARRNL RSTIEKRALQ INSEFLNAAD STQIALDRVE EEVNALADCC DKIAAALSSS
101: AATTSDIIST TERLKQELEV TTQRQEIVNC FLRDYQLSNE EIKALREDEL NENFFQALSH VQEIHSNCKL LLRTHHQRAG LELMDMMAVY QEGAYERLCR
201: WVQAECRKLG DTDNPEVSEL LRTAVRCLKE RPVLFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADH QSNAKNTSEN IALKAGESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA VDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKKSGQLPRR SRTSSDSSQL
501: TSVDALLSSS PSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG LMIENHINLL VQNEVDTLLH KCGLSDKMQI FRSSTSELPL SERQDTSPAM
601: LSECLKAFFG LVLGSEGSLP EFEQIQVPKL RSEACVRVAK TLAEAYEVIY QAVTDQQNGY PDPKSLARHP PDQIRTILGI
101: AATTSDIIST TERLKQELEV TTQRQEIVNC FLRDYQLSNE EIKALREDEL NENFFQALSH VQEIHSNCKL LLRTHHQRAG LELMDMMAVY QEGAYERLCR
201: WVQAECRKLG DTDNPEVSEL LRTAVRCLKE RPVLFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADH QSNAKNTSEN IALKAGESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA VDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKKSGQLPRR SRTSSDSSQL
501: TSVDALLSSS PSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG LMIENHINLL VQNEVDTLLH KCGLSDKMQI FRSSTSELPL SERQDTSPAM
601: LSECLKAFFG LVLGSEGSLP EFEQIQVPKL RSEACVRVAK TLAEAYEVIY QAVTDQQNGY PDPKSLARHP PDQIRTILGI
Arabidopsis Description
At1g31780 [Source:UniProtKB/TrEMBL;Acc:Q6NMI3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.