CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH07953
KRH24006
KRH27971
KRH29310
KRH66350
KRH69706
KRH77487

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31780.1	KRH24006	AT3G48150.1	21798944
AT1G31780.1	KRH27971	AT3G48150.1	21798944
AT1G31780.1	KRH29310	AT3G48150.1	21798944
AT1G31780.1	KRH77487	AT3G48150.1	21798944
AT1G31780.1	KRH66350	AT3G60150.1	21798944
AT1G31780.1	KRH07953	AT5G11980.1	21798944
AT1G31780.1	KRH69706	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76471	Soybean	cytosol, mitochondrion, nucleus	65.15	10.07
KRH28986	Soybean	cytosol, mitochondrion, nucleus	68.18	6.49
VIT_02s0012g00920.t01	Wine grape	mitochondrion	66.67	6.38
Solyc08g075440.2.1	Tomato	plastid	65.15	6.22
AT1G31780.1	Thale cress	cytosol	62.12	6.03
GSMUA_Achr8P14460_001	Banana	mitochondrion	63.64	5.98
OQU92971	Sorghum	mitochondrion	60.61	5.83
TraesCS4D01G248500.1	Wheat	mitochondrion	59.09	5.66
TraesCS4B01G238800.2	Wheat	mitochondrion	59.09	5.66
HORVU4Hr1G066300.1	Barley	mitochondrion	59.09	5.66
TraesCS4A01G062100.1	Wheat	mitochondrion	59.09	5.66
Zm00001d028279_P001	Maize	mitochondrion	60.61	5.66
CDY49154	Canola	plastid	54.55	5.29
CDY12296	Canola	plastid	54.55	5.29
Bra023203.1-P	Field mustard	plastid	54.55	5.29
PGSC0003DMT400004938	Potato	cytosol	1.52	0.2
Zm00001d048022_P001	Maize	cytosol	0.0	0.0
Os03t0225600-01	Rice	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02012601	EnsemblPlants:KRG90345	EnsemblPlantsGene:GLYMA_20G085000	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006891	GO:GO:0008150	GO:GO:0017119
InterPro:COG6	PANTHER:PTHR21506	PFAM:PF06419	ProteinID:KRG90345	ProteinID:KRG90345.1	UniParc:UPI000294A132
UniProt:K7N2B9	MapMan:22.6.2.6	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:31744173..31747160

Molecular Weight (calculated)

7631.2 Da

IEP (calculated)

4.711

GRAVY (calculated)

-0.388

Length

66 amino acids

Sequence
(BLAST)

1: MEGNECTTMG EEDLTINALR KEYLNGNFFK ALSHVQEIHA NCKVLLRTHD QRAGLELMDM MVVYQE

Best Arabidopsis Sequence Match ( AT1G31780.1 )
(BLAST)

001: MASTVGLAPG LSRKLKKVLD CRTDSPDLVA SLNALSSFYD ENSAHARRNL RSTIEKRALQ INSEFLNAAD STQIALDRVE EEVNALADCC DKIAAALSSS
101: AATTSDIIST TERLKQELEV TTQRQEIVNC FLRDYQLSNE EIKALREDEL NENFFQALSH VQEIHSNCKL LLRTHHQRAG LELMDMMAVY QEGAYERLCR
201: WVQAECRKLG DTDNPEVSEL LRTAVRCLKE RPVLFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADH QSNAKNTSEN IALKAGESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA VDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKKSGQLPRR SRTSSDSSQL
501: TSVDALLSSS PSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG LMIENHINLL VQNEVDTLLH KCGLSDKMQI FRSSTSELPL SERQDTSPAM
601: LSECLKAFFG LVLGSEGSLP EFEQIQVPKL RSEACVRVAK TLAEAYEVIY QAVTDQQNGY PDPKSLARHP PDQIRTILGI

Arabidopsis Description

At1g31780 [Source:UniProtKB/TrEMBL;Acc:Q6NMI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.