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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 4
PPI

Inferred distinct locusB in Crop

locusBlocations
EER92716
EER94458
EES07517

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d028279_P001 Maize mitochondrion 97.52 94.63
TraesCS4A01G062100.1 Wheat mitochondrion 90.23 89.84
TraesCS4D01G248500.1 Wheat mitochondrion 90.09 89.7
HORVU4Hr1G066300.1 Barley mitochondrion 89.94 89.55
TraesCS4B01G238800.2 Wheat mitochondrion 89.8 89.4
Os03t0225600-01 Rice cytosol 14.72 88.6
GSMUA_Achr8P14460_001 Banana mitochondrion 74.49 72.79
KRH76471 Soybean cytosol, mitochondrion, nucleus 44.9 72.13
KRH28986 Soybean cytosol, mitochondrion, nucleus 71.87 71.14
AT1G31780.1 Thale cress cytosol 69.68 70.29
VIT_02s0012g00920.t01 Wine grape mitochondrion 69.97 69.57
CDY49154 Canola plastid 68.66 69.16
Bra023203.1-P Field mustard plastid 68.66 69.16
CDY12296 Canola plastid 68.22 68.72
Solyc08g075440.2.1 Tomato plastid 69.1 68.6
PGSC0003DMT400004938 Potato cytosol 50.0 67.39
KRG90345 Soybean cytosol 5.83 60.61
Protein Annotations
MapMan:22.6.2.6EntrezGene:8085267UniProt:A0A1Z5SAM4InterPro:COG6GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005829GO:GO:0006810GO:GO:0006891
GO:GO:0008150GO:GO:0017119EnsemblPlants:OQU92971ProteinID:OQU92971ProteinID:OQU92971.1PFAM:PF06419
PANTHER:PTHR21506SMART:SM01087EnsemblPlantsGene:SORBI_3001G449900UniParc:UPI0001A8331ERefSeq:XP_002468239.1SEG:seg
Description
hypothetical protein
Coordinates
chr1:-:72692257..72699043
Molecular Weight (calculated)
76461.8 Da
IEP (calculated)
5.946
GRAVY (calculated)
-0.247
Length
686 amino acids
Sequence
(BLAST)
001: MAAALAPGVS RKLKKVLETR TDNPDLLASL GALSTFYVQN TPQARRNLKS SIEQRALAIN RHFLDASLPA HKALDRVEGE VHALNDSWKK IEEALSSCSA
101: STGDIISTTE RLQQELEVIT QRQEIVSCFL RDYQLSNEEI NALREEEIDD KFFKALLHVQ EIHSNCKVLL RTHHQRAGLE LMDMMSVYQE GAYERLCRWV
201: QAECKKLGDT DNPEVSELLK MAVRCLKERP VLFKYCAEEV ANMRHHALFR RFISALTRGG PGGLPRPIEV HAHDPLRYAG EMLGWLHQAL ASERELIVVL
301: LDPDAMTDSG PTSRRQSGRD GDSSRGEPDV TFVLDRIFEG ACRPFKVRVE QVLQSQPSLI VSFKLSNTLE FYGYTISELL GEDTALCNTI WSLRDAAQQT
401: FFNILKSRGE KLLRYPPLVA VDLSPPPAVR EGISLLLELI DTYNSMMVPA SGKRPNFDPV ISALLDPIIQ MCEQAAEAQK SKGSLGRRGR TSSDPSGNSR
501: DSISVDAILS KNLSTSVLSA ESSSKVYLIN CLSAIQEPLM GQEVATSYVN NLRSMIEAHI CALVDKEVDS ILRKCGLSNK MPYIKEYGSK ADAKPLADII
601: ETSPQMLLEC LKAFYGIVTG TEGSLPEFEQ LQVPRLRSDA CYGLARALAE SYELIYSAVM DPNNSYPDPR SLVKHSPEQI RTILEI
Best Arabidopsis Sequence Match ( AT1G31780.1 )
(BLAST)
001: MASTVGLAPG LSRKLKKVLD CRTDSPDLVA SLNALSSFYD ENSAHARRNL RSTIEKRALQ INSEFLNAAD STQIALDRVE EEVNALADCC DKIAAALSSS
101: AATTSDIIST TERLKQELEV TTQRQEIVNC FLRDYQLSNE EIKALREDEL NENFFQALSH VQEIHSNCKL LLRTHHQRAG LELMDMMAVY QEGAYERLCR
201: WVQAECRKLG DTDNPEVSEL LRTAVRCLKE RPVLFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADH QSNAKNTSEN IALKAGESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA VDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKKSGQLPRR SRTSSDSSQL
501: TSVDALLSSS PSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG LMIENHINLL VQNEVDTLLH KCGLSDKMQI FRSSTSELPL SERQDTSPAM
601: LSECLKAFFG LVLGSEGSLP EFEQIQVPKL RSEACVRVAK TLAEAYEVIY QAVTDQQNGY PDPKSLARHP PDQIRTILGI
Arabidopsis Description
At1g31780 [Source:UniProtKB/TrEMBL;Acc:Q6NMI3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.