Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023203.1-P | Field mustard | plastid | 99.56 | 99.56 |
| CDY49154 | Canola | plastid | 99.41 | 99.41 |
| AT1G31780.1 | Thale cress | cytosol | 93.98 | 94.12 |
| VIT_02s0012g00920.t01 | Wine grape | mitochondrion | 74.16 | 73.19 |
| KRH28986 | Soybean | cytosol, mitochondrion, nucleus | 73.27 | 72.01 |
| Solyc08g075440.2.1 | Tomato | plastid | 72.83 | 71.78 |
| KRH76471 | Soybean | cytosol, mitochondrion, nucleus | 44.93 | 71.66 |
| PGSC0003DMT400004938 | Potato | cytosol | 53.3 | 71.32 |
| OQU92971 | Sorghum | mitochondrion | 68.72 | 68.22 |
| TraesCS4A01G062100.1 | Wheat | mitochondrion | 68.43 | 67.63 |
| TraesCS4D01G248500.1 | Wheat | mitochondrion | 68.43 | 67.63 |
| HORVU4Hr1G066300.1 | Barley | mitochondrion | 68.14 | 67.34 |
| TraesCS4B01G238800.2 | Wheat | mitochondrion | 68.14 | 67.34 |
| GSMUA_Achr8P14460_001 | Banana | mitochondrion | 68.14 | 66.1 |
| Zm00001d028279_P001 | Maize | mitochondrion | 68.14 | 65.63 |
| Os03t0225600-01 | Rice | cytosol | 9.4 | 56.14 |
| KRG90345 | Soybean | cytosol | 5.29 | 54.55 |
| Zm00001d048022_P001 | Maize | cytosol | 7.93 | 49.54 |
Protein Annotations
| EnsemblPlants:CDY12296 | EnsemblPlantsGene:GSBRNA2T00061366001 | GO:A0A078FGC1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006891 | GO:GO:0008150 | GO:GO:0017119 |
| InterPro:COG6 | PANTHER:PTHR21506 | PFAM:PF06419 | ProteinID:CDY12296 | ProteinID:CDY12296.1 | SEG:seg |
| SMART:SM01087 | UniParc:UPI0004EED8D4 | UniProt:A0A078FGC1 | MapMan:22.6.2.6 | : | : |
Description
BnaA09g24960DBnaA09g24960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGC1]
Coordinates
chrLK032019:-:477657..480667
Molecular Weight (calculated)
75852.7 Da
IEP (calculated)
5.576
GRAVY (calculated)
-0.245
Length
681 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTVGLAPG LSRKLKKVLE CRTDTPDLVA SLNALSSFYD ENSAHARRNL RSTIEKRALQ INSEFLSAAD STQIALDRVE EEVNALADCC DKIAAALSSS
101: AETTSDIIST TERLKQELEV TTQRQEIVGC FLRDYQLSNE EIKALREDEL DESFFQALSH VQEIHSNCKL LLRTHHQRAG LELMGVMAMY QEGAYERLCR
201: WVQAECRKLG DTDNPEVGDL LRTAVRCLKE KPALFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADY KSTAKNTAEN DSLKAAESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA IDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKMSGQLTRR SRTSSDSSQL
501: TTVDALLSSS SSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG SMIENHINLL VQKEVDTLLQ RCGLSDKMQI FRSYTTTELA LSGRQETSPA
601: VLSECLKAFF GLVLGSEGTL PEFEQIQVPK LRSEACVRVA KTLAEDYEVI YRAVTDQQNG YPDPKSLARH PLDQIRTILG I
101: AETTSDIIST TERLKQELEV TTQRQEIVGC FLRDYQLSNE EIKALREDEL DESFFQALSH VQEIHSNCKL LLRTHHQRAG LELMGVMAMY QEGAYERLCR
201: WVQAECRKLG DTDNPEVGDL LRTAVRCLKE KPALFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADY KSTAKNTAEN DSLKAAESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA IDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKMSGQLTRR SRTSSDSSQL
501: TTVDALLSSS SSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG SMIENHINLL VQKEVDTLLQ RCGLSDKMQI FRSYTTTELA LSGRQETSPA
601: VLSECLKAFF GLVLGSEGTL PEFEQIQVPK LRSEACVRVA KTLAEDYEVI YRAVTDQQNG YPDPKSLARH PLDQIRTILG I
001: MASTVGLAPG LSRKLKKVLD CRTDSPDLVA SLNALSSFYD ENSAHARRNL RSTIEKRALQ INSEFLNAAD STQIALDRVE EEVNALADCC DKIAAALSSS
101: AATTSDIIST TERLKQELEV TTQRQEIVNC FLRDYQLSNE EIKALREDEL NENFFQALSH VQEIHSNCKL LLRTHHQRAG LELMDMMAVY QEGAYERLCR
201: WVQAECRKLG DTDNPEVSEL LRTAVRCLKE RPVLFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADH QSNAKNTSEN IALKAGESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA VDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKKSGQLPRR SRTSSDSSQL
501: TSVDALLSSS PSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG LMIENHINLL VQNEVDTLLH KCGLSDKMQI FRSSTSELPL SERQDTSPAM
601: LSECLKAFFG LVLGSEGSLP EFEQIQVPKL RSEACVRVAK TLAEAYEVIY QAVTDQQNGY PDPKSLARHP PDQIRTILGI
101: AATTSDIIST TERLKQELEV TTQRQEIVNC FLRDYQLSNE EIKALREDEL NENFFQALSH VQEIHSNCKL LLRTHHQRAG LELMDMMAVY QEGAYERLCR
201: WVQAECRKLG DTDNPEVSEL LRTAVRCLKE RPVLFKYCAE EVGNLRHNAL FRRFISALTR GGPGGMPRPI EVHAHDPLRY VGDMLGWLHQ ALASERELVH
301: ALFDIDSADH QSNAKNTSEN IALKAGESDF TFVLDRIFEG VCRPFKVRVE QVLQSQPSLI ISYKLTNTLE FYSYTISDLL GRDTALCNTI GMVKDAAQKT
401: FFDILKTRGE KLLRYPPPVA VDLSPPPAVR EGVSLTLEII ENYNSMMVSA SGEKPAFDPV LSALLDPIIK MCEQAAEAHK SKKSGQLPRR SRTSSDSSQL
501: TSVDALLSSS PSPPQNNETP SKIFLINCLC AIQQPLLRHD VASQYVTNIG LMIENHINLL VQNEVDTLLH KCGLSDKMQI FRSSTSELPL SERQDTSPAM
601: LSECLKAFFG LVLGSEGSLP EFEQIQVPKL RSEACVRVAK TLAEAYEVIY QAVTDQQNGY PDPKSLARHP PDQIRTILGI
Arabidopsis Description
At1g31780 [Source:UniProtKB/TrEMBL;Acc:Q6NMI3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.