Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013840.1-P | Field mustard | mitochondrion | 86.41 | 100.0 |
| CDY03412 | Canola | plastid | 97.89 | 97.63 |
| CDX92658 | Canola | plastid | 90.77 | 90.89 |
| CDY11039 | Canola | cytosol | 89.84 | 89.96 |
| AT4G24840.1 | Thale cress | cytosol, plastid | 85.62 | 85.85 |
| CDY51233 | Canola | cytosol, plastid | 72.03 | 75.41 |
| CDX70811 | Canola | plastid | 71.24 | 74.48 |
| KRH03947 | Soybean | cytosol | 67.41 | 67.68 |
| VIT_17s0000g01560.t01 | Wine grape | cytosol | 65.96 | 66.58 |
| KRH57220 | Soybean | cytosol | 65.96 | 66.23 |
| PGSC0003DMT400067640 | Potato | cytosol, plastid | 62.66 | 64.02 |
| Solyc08g006660.1.1 | Tomato | plastid | 62.66 | 64.02 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.44 | 59.07 |
| OQU90613 | Sorghum | cytosol | 56.73 | 57.49 |
| Zm00001d012851_P001 | Maize | cytosol | 55.94 | 57.37 |
| Os03t0849600-01 | Rice | cytosol | 56.2 | 56.5 |
| HORVU5Hr1G121540.1 | Barley | cytosol | 54.49 | 55.89 |
| TraesCS5D01G536700.1 | Wheat | cytosol | 55.67 | 55.24 |
| TraesCS5B01G549700.1 | Wheat | cytosol | 55.54 | 55.1 |
| TraesCS4A01G335400.1 | Wheat | cytosol | 55.67 | 55.02 |
| Zm00001d034842_P001 | Maize | cytosol | 56.46 | 53.84 |
Protein Annotations
| MapMan:22.6.2.2 | GO:A0A078H9I8 | UniProt:A0A078H9I8 | EnsemblPlants:CDY34317 | ProteinID:CDY34317 | ProteinID:CDY34317.1 |
| InterPro:COG2 | InterPro:COG_complex_COG2_C | InterPro:COG_su2_N | ncoils:Coil | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0007030 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016043 |
| EnsemblPlantsGene:GSBRNA2T00056356001 | PFAM:PF06148 | PFAM:PF12022 | PANTHER:PTHR12961 | UniParc:UPI0004EE82AA | SEG:seg |
Description
BnaA01g14200DBnaA01g14200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9I8]
Coordinates
chrLK032332:-:283809..288147
Molecular Weight (calculated)
84621.8 Da
IEP (calculated)
6.037
GRAVY (calculated)
-0.155
Length
758 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDLVTTLPS PSSAPRSASD FFSDPYDSHP LWFKPSLFLS PVFDSESYIS ELRTFVPFDT LRSELRSHLA SLNRELVDLI NRDYADFVSL STKLVDIDEA
101: VVRMRAPLLG LREKIAAFRG SVEAALFALR SGLQQRSDAA SAREVLELLL DTFHVVSKVE KLIKVLPSAP SDWQKEDGGV SLRSSVSVEN STQQDGTTMR
201: ETQSMLLERI ASEMNRLKFY MAHAQNLPFV ENMEKRIQSA NVLLDASLGH SFIDGLNNSD TSVLYNCLRA YAAIDNTKSA EEIFRTTIVA PFIHKIVALE
301: TSNNAAGSSG DELENDYKQI KHFIAKDCKM LLGISSTDKS GLHVFDFLAN SILKEVLSAI QKVKPGAFSP GRPTQFLKNY KASLEFLAYL EGYCPSRTAV
401: TKFRTEAVYI EFMKQWNVGV YFSLRFQEIA GALDSALTSP SLVFIQDSDL DKRSSPNLIL RQSATLLESL RSCWEEDVLV FSAADKFLRL TLQLLSRYCV
501: WVSSSLHTRR GNPSPSPGCD WAVSATTEDF VYVIHDVNDL VSEVCGDYLG HISRHLSSCS TEVLDVVRTS MLQGGDKLKE VLPLLTNTII EIIVDKSVED
601: LRQVRGITTT YRMTNKPPPV RHSPYVVGIL RHVKAFLEGD KATHYLTQET REEILLGTVT DITRRYYESA DEVVSLARRT ESSLQQFRRK AQKRAGAASG
701: ASDDNVSETD KMCMQLFLDA QEYGRNIAAL GLKPADIPVY CSLWQCVAPA DRQNTISV
101: VVRMRAPLLG LREKIAAFRG SVEAALFALR SGLQQRSDAA SAREVLELLL DTFHVVSKVE KLIKVLPSAP SDWQKEDGGV SLRSSVSVEN STQQDGTTMR
201: ETQSMLLERI ASEMNRLKFY MAHAQNLPFV ENMEKRIQSA NVLLDASLGH SFIDGLNNSD TSVLYNCLRA YAAIDNTKSA EEIFRTTIVA PFIHKIVALE
301: TSNNAAGSSG DELENDYKQI KHFIAKDCKM LLGISSTDKS GLHVFDFLAN SILKEVLSAI QKVKPGAFSP GRPTQFLKNY KASLEFLAYL EGYCPSRTAV
401: TKFRTEAVYI EFMKQWNVGV YFSLRFQEIA GALDSALTSP SLVFIQDSDL DKRSSPNLIL RQSATLLESL RSCWEEDVLV FSAADKFLRL TLQLLSRYCV
501: WVSSSLHTRR GNPSPSPGCD WAVSATTEDF VYVIHDVNDL VSEVCGDYLG HISRHLSSCS TEVLDVVRTS MLQGGDKLKE VLPLLTNTII EIIVDKSVED
601: LRQVRGITTT YRMTNKPPPV RHSPYVVGIL RHVKAFLEGD KATHYLTQET REEILLGTVT DITRRYYESA DEVVSLARRT ESSLQQFRRK AQKRAGAASG
701: ASDDNVSETD KMCMQLFLDA QEYGRNIAAL GLKPADIPVY CSLWQCVAPA DRQNTISV
001: MSDLVATSPS PSSAPRSATD FFSDPYDSHP LWFKPSLFLS PNFDSESYIS ELRTFVPFDT LRSELRSHLA SLNRELVDLI NRDYADFVNL STKLVDIDAA
101: VVRMRAPLLE LREKITGFRG SVEAALFALR NGLQQRSDAA AAREVLELLL DTFHVVSKVE KLIKVLPSTP SDWQNEDANS MGRSSMNDEN STQQDGTTMR
201: ETQSMLLERI ASEMNRLKFY MAHAQNLPFI ENMEKRIQSA SVLLDASLGH CFIDGLNNSD TSVLYNCLRA YAAIDNTNAA EEIFRTTIVA PFIQKIITHE
301: TTTNAAGTSE DELENDYKQI KHFIAKDCKM LLEISSTDKS GLHVFDFLAN SILKEVLWAI QKVKPGAFSP GRPTEFLKNY KASLDFLAYL EGYCPSRSAV
401: TKFRAEAICV EFMKQWNVGV YFSLRFQEIA GALDSALTSP SLVFIQDSDK ESSLNLILRQ SDTLLECLRS CWKEDVLVFS AADKFLRLTL QLLSRYSFWV
501: SSALNNRKSN ASPSPGCEWA VSATAEDFVY VIHDVNCLVS EVCGDYLGHI SQYLSSSSTE VLDVVRISIE QGGVSLEKVL PLLTKTIIDV IVDKSVEDLR
601: QLRGITATFR MTNKPLPVRH SPYVVGLLRP VKAFLEGDKA RNYLTQKTKE ELLHGSVSEI TRRYYELAAD VVSVARKTQS SLQKLRQNAQ RRGGAASGVS
701: DQNVSETDKM CMQLFLDIQE YGRNVSALGL KPADIPEYCS FWQCVAPADR QNSISV
101: VVRMRAPLLE LREKITGFRG SVEAALFALR NGLQQRSDAA AAREVLELLL DTFHVVSKVE KLIKVLPSTP SDWQNEDANS MGRSSMNDEN STQQDGTTMR
201: ETQSMLLERI ASEMNRLKFY MAHAQNLPFI ENMEKRIQSA SVLLDASLGH CFIDGLNNSD TSVLYNCLRA YAAIDNTNAA EEIFRTTIVA PFIQKIITHE
301: TTTNAAGTSE DELENDYKQI KHFIAKDCKM LLEISSTDKS GLHVFDFLAN SILKEVLWAI QKVKPGAFSP GRPTEFLKNY KASLDFLAYL EGYCPSRSAV
401: TKFRAEAICV EFMKQWNVGV YFSLRFQEIA GALDSALTSP SLVFIQDSDK ESSLNLILRQ SDTLLECLRS CWKEDVLVFS AADKFLRLTL QLLSRYSFWV
501: SSALNNRKSN ASPSPGCEWA VSATAEDFVY VIHDVNCLVS EVCGDYLGHI SQYLSSSSTE VLDVVRISIE QGGVSLEKVL PLLTKTIIDV IVDKSVEDLR
601: QLRGITATFR MTNKPLPVRH SPYVVGLLRP VKAFLEGDKA RNYLTQKTKE ELLHGSVSEI TRRYYELAAD VVSVARKTQS SLQKLRQNAQ RRGGAASGVS
701: DQNVSETDKM CMQLFLDIQE YGRNVSALGL KPADIPEYCS FWQCVAPADR QNSISV
Arabidopsis Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport, Golgi organization; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: COG complex component, COG2 (InterP /.../009316); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G24840]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.