Skip to main content
crop-pal logo
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • nucleus 2
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d032213_P001 Maize nucleus 77.3 81.02
EES15038 Sorghum nucleus 83.24 78.57
Os08t0432800-01 Rice nucleus 59.73 64.06
GSMUA_Achr6P30610_001 Banana nucleus 31.35 60.73
Zm00001d005740_P001 Maize nucleus 56.76 60.34
GSMUA_Achr7P07280_001 Banana nucleus 30.54 58.55
Solyc04g006990.2.1 Tomato nucleus 31.08 54.5
Bra025158.1-P Field mustard nucleus 31.35 52.02
PGSC0003DMT400019294 Potato nucleus 32.43 45.98
VIT_01s0011g02940.t01 Wine grape nucleus 41.89 44.41
Solyc05g009880.2.1 Tomato nucleus 35.95 44.33
PGSC0003DMT400002155 Potato nucleus 36.49 43.27
Zm00001d028504_P001 Maize nucleus 42.43 40.15
CDX99756 Canola nucleus 35.95 39.94
KRH70619 Soybean nucleus 40.0 39.78
CDY13580 Canola nucleus 35.68 39.4
Bra026510.1-P Field mustard nucleus 35.68 39.4
KRG92013 Soybean nucleus 36.76 39.19
CDX83546 Canola nucleus 35.41 39.1
KRH34774 Soybean nucleus 37.3 39.09
KRH75497 Soybean nucleus 39.46 38.83
CDY07364 Canola nucleus 36.76 38.53
Bra004015.1-P Field mustard nucleus 36.76 38.53
CDX95989 Canola nucleus 35.95 37.68
CDY33592 Canola nucleus 35.95 37.57
Bra004338.1-P Field mustard nucleus 35.95 37.57
Zm00001d034596_P001 Maize nucleus 23.24 37.55
AT3G25710.1 Thale cress nucleus 34.86 37.5
AT1G68810.1 Thale cress nucleus 37.3 37.5
CDY04259 Canola nucleus 35.68 37.29
Zm00001d005919_P001 Maize nucleus 21.08 36.45
Zm00001d020763_P001 Maize nucleus 21.62 35.09
Zm00001d047878_P001 Maize nucleus 39.46 34.19
Zm00001d031818_P001 Maize nucleus 19.73 30.54
Zm00001d039764_P001 Maize nucleus 19.19 27.2
Zm00001d037528_P001 Maize plastid 17.84 24.26
Protein Annotations
EntrezGene:103653468MapMan:15.5.32Gene3D:4.10.280.10UniProt:A0A1D6Q1G9ProteinID:AQK52460.1GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005515GO:GO:0046983InterPro:HLH_DNA-bd_sf
InterPro:IPR011598InterPro:IPR036638PFAM:PF00010PFscan:PS50888PANTHER:PTHR12565PANTHER:PTHR12565:SF98
SMART:SM00353SUPFAM:SSF47459SUPFAM:SSF55021UniParc:UPI0004DEC981EnsemblPlantsGene:Zm00001d050394EnsemblPlants:Zm00001d050394_P001
EnsemblPlants:Zm00001d050394_T001InterPro:bHLH_domSEG:seg:::
Description
bHLH-transcription factor 40Putative HLH DNA-binding domain superfamily protein
Coordinates
chr4:-:85655816..85658613
Molecular Weight (calculated)
37810.2 Da
IEP (calculated)
5.397
GRAVY (calculated)
-0.310
Length
370 amino acids
Sequence
(BLAST)
001: MWEGGGFHGS HEALLLQAAG SGAADYGHGA GPALLPWLGP AAGAAPGFSY MAPHHAQPGP SGAEAAASPF GFGGGGYSDG GVGGQFGVFG GPETALPAPH
101: GLAAAAGGGT SAMQHGSRMV SGLLGTLQME LGRMAAKEIM DAKALAASRS HSEAERRRRQ RINSHLARLR SLLPNTSKTD KASLLAEVIE HVKELKRQTS
201: AVLDVEGEEA AAARQRLQLL PTEADDLAVD ATEDGEGRLV VRASLCCEDR AGLIPDIARA LAALRLRAHR AEIATLGGRV RNVLLITAAA DDDDGEGEGD
301: DDDDDVEGDG GCAGGNASSS RRHELVASIQ EALRGVMDCK TASSDTSSSS NGGGSMKRQR MSGAHEQGSL
Best Arabidopsis Sequence Match ( AT1G68810.1 )
(BLAST)
001: MCAKKEEEEE EEEDSSEAMN NIQNYQNDLF FHQLISHHHH HHHDPSQSET LGASGNVGSG FTIFSQDSVS PIWSLPPPTS IQPPFDQFPP PSSSPASFYG
101: SFFNRSRAHH QGLQFGYEGF GGATSAAHHH HEQLRILSEA LGPVVQAGSG PFGLQAELGK MTAQEIMDAK ALAASKSHSE AERRRRERIN NHLAKLRSIL
201: PNTTKTDKAS LLAEVIQHVK ELKRETSVIS ETNLVPTESD ELTVAFTEEE ETGDGRFVIK ASLCCEDRSD LLPDMIKTLK AMRLKTLKAE ITTVGGRVKN
301: VLFVTGEESS GEEVEEEYCI GTIEEALKAV MEKSNVEESS SSGNAKRQRM SSHNTITIVE QQQQYNQR
Arabidopsis Description
BHLH30Transcription factor bHLH30 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.