Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99756 | Canola | nucleus | 84.01 | 86.79 |
| CDX83546 | Canola | nucleus | 84.3 | 86.57 |
| CDY13580 | Canola | nucleus | 84.3 | 86.57 |
| Bra025158.1-P | Field mustard | nucleus | 55.81 | 86.1 |
| Bra026510.1-P | Field mustard | nucleus | 83.72 | 85.97 |
| GSMUA_Achr6P30610_001 | Banana | nucleus | 36.63 | 65.97 |
| Solyc04g006990.2.1 | Tomato | nucleus | 38.08 | 62.09 |
| GSMUA_Achr7P07280_001 | Banana | nucleus | 34.59 | 61.66 |
| GSMUA_Achr11P... | Banana | nucleus | 34.3 | 59.3 |
| GSMUA_Achr1P21280_001 | Banana | nucleus | 33.14 | 57.29 |
| PGSC0003DMT400019294 | Potato | nucleus | 40.7 | 53.64 |
| Solyc05g009880.2.1 | Tomato | nucleus | 45.64 | 52.33 |
| VIT_01s0011g02940.t01 | Wine grape | nucleus | 52.03 | 51.29 |
| PGSC0003DMT400002155 | Potato | nucleus | 45.93 | 50.64 |
| KRG92013 | Soybean | nucleus | 49.42 | 48.99 |
| KRH34774 | Soybean | nucleus | 49.42 | 48.16 |
| AT1G68810.1 | Thale cress | nucleus | 49.71 | 46.47 |
| KRH75497 | Soybean | nucleus | 49.42 | 45.21 |
| KRH70619 | Soybean | nucleus | 48.55 | 44.89 |
| HORVU4Hr1G061760.1 | Barley | nucleus | 44.19 | 37.81 |
| TraesCS5B01G229000.1 | Wheat | nucleus | 36.63 | 37.72 |
| TraesCS5D01G237300.1 | Wheat | nucleus | 36.92 | 37.69 |
| TraesCS4D01G217700.1 | Wheat | nucleus | 44.48 | 37.68 |
| TraesCS4A01G087000.1 | Wheat | nucleus | 44.19 | 37.44 |
| TraesCS4B01G217400.1 | Wheat | nucleus | 44.19 | 37.44 |
| Os08t0432800-01 | Rice | nucleus | 37.5 | 37.39 |
| Zm00001d028504_P001 | Maize | nucleus | 42.44 | 37.34 |
| TraesCS5A01G230500.1 | Wheat | nucleus | 36.05 | 37.01 |
| Os03t0260600-01 | Rice | nucleus | 43.6 | 36.67 |
| Zm00001d032213_P001 | Maize | nucleus | 37.21 | 36.26 |
| Os09t0410700-00 | Rice | nucleus | 37.5 | 35.54 |
| EER98886 | Sorghum | nucleus | 36.05 | 35.13 |
| Zm00001d005740_P001 | Maize | nucleus | 35.47 | 35.06 |
| Zm00001d050394_P001 | Maize | nucleus | 37.5 | 34.86 |
| AT3G56770.1 | Thale cress | nucleus | 22.97 | 34.35 |
| HORVU5Hr1G066530.2 | Barley | cytosol, nucleus | 36.34 | 34.06 |
| OQU92884 | Sorghum | nucleus | 43.9 | 33.93 |
| EES15038 | Sorghum | nucleus | 38.08 | 33.42 |
| AT2G41130.1 | Thale cress | nucleus | 24.13 | 32.81 |
| Zm00001d047878_P001 | Maize | nucleus | 40.7 | 32.79 |
| AT2G40200.1 | Thale cress | nucleus | 21.51 | 29.13 |
| AT4G38070.1 | Thale cress | plastid | 19.77 | 26.56 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:822159 | UniProt:A0A178VA88 | ProteinID:AEE77056.1 | EMBL:AF488571 |
| ArrayExpress:AT3G25710 | EnsemblPlantsGene:AT3G25710 | RefSeq:AT3G25710 | TAIR:AT3G25710 | RefSeq:AT3G25710-TAIR-G | EnsemblPlants:AT3G25710.1 |
| TAIR:AT3G25710.1 | EMBL:AY058840 | EMBL:AY079033 | EMBL:AY086383 | Unigene:At.22148 | ProteinID:BAA95758.1 |
| Symbol:BHLH32 | EMBL:DQ205679 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009653 | GO:GO:0009718 |
| GO:GO:0009987 | GO:GO:0009991 | GO:GO:0016036 | GO:GO:0030154 | GO:GO:0046983 | GO:GO:0048364 |
| GO:GO:0080147 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | RefSeq:NP_189199.1 | ProteinID:OAP01852.1 |
| PFAM:PF00010 | PO:PO:0000013 | PO:PO:0000026 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000272 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008011 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF77 | UniProt:Q9LS08 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00000A2D5A | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BHLH32Transcription factor AIG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS08]
Coordinates
chr3:+:9369499..9371487
Molecular Weight (calculated)
39498.9 Da
IEP (calculated)
5.990
GRAVY (calculated)
-0.845
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MYAMKEEDCL QTFHNLQDYQ DQFHLHHHPQ ILPWSSTSLP SFDPLHFPSN PTRYSDPVHY FNRRASSSSS SFDYNDGFVS PPPSMDHPQN HLRILSEALG
101: PIMRRGSSFG FDGEIMGKLS AQEVMDAKAL AASKSHSEAE RRRRERINTH LAKLRSILPN TTKTDKASLL AEVIQHMKEL KRQTSQITDT YQVPTECDDL
201: TVDSSYNDEE GNLVIRASFC CQDRTDLMHD VINALKSLRL RTLKAEIATV GGRVKNILFL SREYDDEEDH DSYRRNFDGD DVEDYDEERM MNNRVSSIEE
301: ALKAVIEKCV HNNDESNDNN NLEKSSSGGI KRQRTSKMVN RCYN
101: PIMRRGSSFG FDGEIMGKLS AQEVMDAKAL AASKSHSEAE RRRRERINTH LAKLRSILPN TTKTDKASLL AEVIQHMKEL KRQTSQITDT YQVPTECDDL
201: TVDSSYNDEE GNLVIRASFC CQDRTDLMHD VINALKSLRL RTLKAEIATV GGRVKNILFL SREYDDEEDH DSYRRNFDGD DVEDYDEERM MNNRVSSIEE
301: ALKAVIEKCV HNNDESNDNN NLEKSSSGGI KRQRTSKMVN RCYN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.