Factsheet for Bra025158.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra014221.1-P
Bra018049.1-P
Bra018081.1-P
Bra020748.1-P
Bra029904.1-P
Bra033769.1-P
Bra039652.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25710.1	Bra014221.1-P	AT1G49850.1	21798944
AT3G25710.1	Bra039652.1-P	AT1G49850.1	21798944
AT3G25710.1	Bra020748.1-P	AT3G06430.1	21798944
AT3G25710.1	Bra018081.1-P	AT3G48150.1	21798944
AT3G25710.1	Bra033769.1-P	AT3G48150.1	21798944
AT3G25710.1	Bra018049.1-P	AT3G48550.1	21798944
AT3G25710.1	Bra029904.1-P	AT3G48550.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13580	Canola	nucleus	100.0	66.57
CDX83546	Canola	nucleus	98.65	65.67
GSMUA_Achr6P30610_001	Banana	nucleus	54.71	63.87
Solyc04g006990.2.1	Tomato	nucleus	59.19	62.56
GSMUA_Achr7P07280_001	Banana	nucleus	52.47	60.62
GSMUA_Achr11P...	Banana	nucleus	53.81	60.3
GSMUA_Achr1P21280_001	Banana	nucleus	51.12	57.29
Bra026510.1-P	Field mustard	nucleus	83.86	55.82
AT3G25710.1	Thale cress	nucleus	86.1	55.81
PGSC0003DMT400019294	Potato	nucleus	57.4	49.04
Solyc05g009880.2.1	Tomato	nucleus	59.64	44.33
PGSC0003DMT400002155	Potato	nucleus	59.64	42.63
VIT_01s0011g02940.t01	Wine grape	nucleus	60.99	38.97
Bra004015.1-P	Field mustard	nucleus	59.64	37.68
KRG92013	Soybean	nucleus	58.3	37.46
KRH34774	Soybean	nucleus	57.85	36.54
Bra004338.1-P	Field mustard	nucleus	57.85	36.44
KRH75497	Soybean	nucleus	60.54	35.9
KRH70619	Soybean	nucleus	58.3	34.95
Os08t0432800-01	Rice	nucleus	53.81	34.78
TraesCS5B01G229000.1	Wheat	nucleus	51.57	34.43
TraesCS5D01G237300.1	Wheat	nucleus	52.02	34.42
TraesCS5A01G230500.1	Wheat	nucleus	51.12	34.03
Bra016951.1-P	Field mustard	nucleus	37.67	33.07
Zm00001d032213_P001	Maize	nucleus	51.12	32.29
Zm00001d005740_P001	Maize	nucleus	50.22	32.18
Bra004599.1-P	Field mustard	nucleus	35.87	32.0
HORVU4Hr1G061760.1	Barley	nucleus	56.95	31.59
Zm00001d028504_P001	Maize	nucleus	55.16	31.46
EER98886	Sorghum	nucleus	49.78	31.44
Os09t0410700-00	Rice	nucleus	51.12	31.41
Zm00001d050394_P001	Maize	nucleus	52.02	31.35
HORVU5Hr1G066530.2	Barley	cytosol, nucleus	51.57	31.34
Os03t0260600-01	Rice	nucleus	57.4	31.3
TraesCS4A01G087000.1	Wheat	nucleus	56.95	31.28
TraesCS4B01G217400.1	Wheat	nucleus	56.95	31.28
TraesCS4D01G217700.1	Wheat	nucleus	56.95	31.28
Bra014672.1-P	Field mustard	nucleus	31.39	30.17
EES15038	Sorghum	nucleus	52.02	29.59
OQU92884	Sorghum	nucleus	56.95	28.54
Bra000177.1-P	Field mustard	nucleus	29.15	27.9
Bra017024.1-P	Field mustard	nucleus, plastid	31.39	27.67
Zm00001d047878_P001	Maize	nucleus	52.02	27.17
Bra010635.1-P	Field mustard	plastid	26.46	26.34

Protein Annotations

EnsemblPlants:Bra025158.1	EnsemblPlants:Bra025158.1-P	EnsemblPlantsGene:Bra025158	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR12565	PANTHER:PTHR12565:SF77	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000253F780	UniProt:M4E8Q2	MapMan:15.5.32	:	:

Description

AT3G25710 (E=2e-083) BHLH32, ATAIG1 | BHLH32 (BASIC HELIX-LOOP-HELIX 32); DNA binding / transcription factor

Coordinates

chrA06:-:23105050..23106022

Molecular Weight (calculated)

25312.6 Da

IEP (calculated)

6.406

GRAVY (calculated)

-0.834

Length

223 amino acids

Sequence
(BLAST)

001: MGKMSAQEVM DAKALAASKS HSEAERRRRE RINTHLAKLR SILPNTTKTD KASLLAEVIQ HMKELKRQTS LVTETCQVPT ESDDLTVDST YNDEEGNLVI
101: RASFCCGDRT DLIHDVINAL KSLHLRTLKA EIATVGGRVK NVLFLSRDDH EDDGFEYRND ALEHDDEEKR YNRVSSIEEA LKAVIEKCVN NNDENNDNNN
201: LEKSSSGSIK RQRTSKMANR FYN

Best Arabidopsis Sequence Match ( AT3G25710.1 )
(BLAST)

001: MYAMKEEDCL QTFHNLQDYQ DQFHLHHHPQ ILPWSSTSLP SFDPLHFPSN PTRYSDPVHY FNRRASSSSS SFDYNDGFVS PPPSMDHPQN HLRILSEALG
101: PIMRRGSSFG FDGEIMGKLS AQEVMDAKAL AASKSHSEAE RRRRERINTH LAKLRSILPN TTKTDKASLL AEVIQHMKEL KRQTSQITDT YQVPTECDDL
201: TVDSSYNDEE GNLVIRASFC CQDRTDLMHD VINALKSLRL RTLKAEIATV GGRVKNILFL SREYDDEEDH DSYRRNFDGD DVEDYDEERM MNNRVSSIEE
301: ALKAVIEKCV HNNDESNDNN NLEKSSSGGI KRQRTSKMVN RCYN

Arabidopsis Description

BHLH32Transcription factor AIG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS08]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.