Factsheet for Bra010635.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90384	Canola	cytosol	70.98	97.55
AT4G38070.1	Thale cress	plastid	79.91	69.92
KRH69661	Soybean	mitochondrion	37.95	40.09
PGSC0003DMT400060615	Potato	cytosol	30.36	30.36
TraesCS5A01G245600.1	Wheat	nucleus	24.55	28.5
GSMUA_Achr3P06780_001	Banana	cytosol	25.45	27.8
TraesCS2A01G472300.1	Wheat	nucleus	25.89	27.62
TraesCS2B01G494900.1	Wheat	nucleus	25.89	27.49
Solyc04g014360.2.1	Tomato	nucleus	33.04	27.31
TraesCS5B01G243000.1	Wheat	nucleus	25.45	27.27
TraesCS5D01G252300.1	Wheat	nucleus	25.45	27.27
TraesCS2D01G472000.1	Wheat	nucleus	26.34	27.19
HORVU5Hr1G069580.1	Barley	nucleus	25.0	26.67
Zm00001d005919_P001	Maize	nucleus	25.45	26.64
Bra025158.1-P	Field mustard	nucleus	26.34	26.46
EER96881	Sorghum	cytosol, nucleus, peroxisome, plastid	26.34	26.22
Os08t0477900-00	Rice	nucleus	25.89	26.01
Zm00001d020763_P001	Maize	nucleus	26.34	25.88
GSMUA_Achr9P15140_001	Banana	plastid	26.34	25.65
Zm00001d031818_P001	Maize	nucleus	25.45	23.85
EES14023	Sorghum	nucleus	24.11	22.13
Bra004599.1-P	Field mustard	nucleus	23.66	21.2
Bra014672.1-P	Field mustard	nucleus	21.88	21.12
Bra016951.1-P	Field mustard	nucleus	23.66	20.87
Bra026510.1-P	Field mustard	nucleus	30.8	20.6
Bra000177.1-P	Field mustard	nucleus	20.54	19.74
Bra004338.1-P	Field mustard	nucleus	28.12	17.8
Bra017024.1-P	Field mustard	nucleus, plastid	20.09	17.79
Bra004015.1-P	Field mustard	nucleus	26.79	17.0
CDY52514	Canola	cytosol	91.52	14.25

Protein Annotations

EnsemblPlants:Bra010635.1	EnsemblPlants:Bra010635.1-P	EnsemblPlantsGene:Bra010635	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR12565	PANTHER:PTHR12565:SF196	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI00025465A3	UniProt:M4D2D5	MapMan:15.5.32	:	:

Description

AT4G38070 (E=4e-084) | bHLH family protein

Coordinates

chrA08:+:15711386..15712214

Molecular Weight (calculated)

25020.2 Da

IEP (calculated)

10.620

GRAVY (calculated)

-0.569

Length

224 amino acids

Sequence
(BLAST)

001: MVLLQQLEQG MRPLSQRYNA TAYSATIGRN FFTNGASSSN LFTSRGYSAN AKPKSKTESK EMAAKKHSDA ERRRRLRINY QFEALRTILP NLIKQDKASV
101: LGETVRYFKE LKKLVNEIPT TPSLEDSLRL GQCKNRDFAR VVFNCSDREG LMSEVAESMK AADAKAVRAE MMTVGGRTKC VLFVQGVNGN EGLVKLKKAL
201: KPVVNRKLEA ENNNNAGSLL PQQQ

Best Arabidopsis Sequence Match ( AT4G38070.1 )
(BLAST)

001: MVLLHHVSLS HYQNSSSLFS SSSESILCLF LVLCVMQLEQ GMRPISRCYN PTAYSTTMGR SFFAGAATSS KLFSRGFSVT KPKSKTESKE VAAKKHSDAE
101: RRRRLRINSQ FATLRTILPN LVKQDKASVL GETVRYFNEL KKMVQDIPTT PSLEDNLRLD HCNNNRDLAR VVFSCSDREG LMSEVAESMK AVKAKAVRAE
201: IMTVGGRTKC ALFVQGVNGN EGLVKLKKSL KLVVNGKSSS EAKNNNNGGS LLIQQQ

Arabidopsis Description

BHLH131Transcription factor bHLH131 [Source:UniProtKB/Swiss-Prot;Acc:P0CB25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.