Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G245600.1 | Wheat | nucleus | 87.62 | 95.34 |
| TraesCS5D01G252300.1 | Wheat | nucleus | 94.29 | 94.74 |
| TraesCS5B01G243000.1 | Wheat | nucleus | 92.38 | 92.82 |
| Zm00001d005919_P001 | Maize | nucleus | 66.19 | 64.95 |
| Zm00001d020763_P001 | Maize | nucleus | 69.52 | 64.04 |
| EER96881 | Sorghum | cytosol, nucleus, peroxisome, plastid | 67.62 | 63.11 |
| GSMUA_Achr3P06780_001 | Banana | cytosol | 52.38 | 53.66 |
| GSMUA_Achr9P15140_001 | Banana | plastid | 52.86 | 48.26 |
| VIT_18s0001g07410.t01 | Wine grape | nucleus | 37.14 | 35.29 |
| KRH16843 | Soybean | cytosol | 38.57 | 33.75 |
| CDX90384 | Canola | cytosol | 25.71 | 33.13 |
| KRH72457 | Soybean | nucleus | 39.05 | 32.28 |
| PGSC0003DMT400060615 | Potato | cytosol | 33.33 | 31.25 |
| HORVU1Hr1G024280.2 | Barley | plastid | 30.95 | 30.66 |
| PGSC0003DMT400024185 | Potato | nucleus | 28.57 | 29.41 |
| Solyc04g076240.1.1 | Tomato | nucleus | 27.62 | 28.29 |
| HORVU3Hr1G027630.3 | Barley | nucleus | 33.81 | 28.17 |
| Solyc04g014360.2.1 | Tomato | nucleus | 34.76 | 26.94 |
| KRH69661 | Soybean | mitochondrion | 26.67 | 26.42 |
| HORVU3Hr1G018680.1 | Barley | nucleus | 33.33 | 26.12 |
| Bra010635.1-P | Field mustard | plastid | 26.67 | 25.0 |
| AT4G38070.1 | Thale cress | plastid | 27.14 | 22.27 |
| HORVU5Hr1G066530.2 | Barley | cytosol, nucleus | 36.19 | 20.71 |
| HORVU4Hr1G061760.1 | Barley | nucleus | 35.71 | 18.66 |
| CDY52514 | Canola | cytosol | 26.67 | 3.89 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G069580.1 | EnsemblPlantsGene:HORVU5Hr1G069580 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF185 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0002947ED2 | UniProt:M0VDI3 | MapMan:15.5.32 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:523361919..523363336
Molecular Weight (calculated)
22722.1 Da
IEP (calculated)
10.205
GRAVY (calculated)
-0.433
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLRTRGGEP EQEAEMDNQR SPLARGARTS RSHSEAERKR RRRINAHLAT LRSLLPSASQ MDKAALLGEV VRHVRELRGD ADGGAVAGVA VPGESDEVGV
101: EEERWDARES AKRVRAWVCC ADRPGLMSEL GRAVRSVSAR AVRAEIATVG GRTRSVLELE AGYGQAAGAS RPALHAALRA VLLTREDQLL AVESYKRQCF
201: SALISQGLGS
101: EEERWDARES AKRVRAWVCC ADRPGLMSEL GRAVRSVSAR AVRAEIATVG GRTRSVLELE AGYGQAAGAS RPALHAALRA VLLTREDQLL AVESYKRQCF
201: SALISQGLGS
001: MVLLHHVSLS HYQNSSSLFS SSSESILCLF LVLCVMQLEQ GMRPISRCYN PTAYSTTMGR SFFAGAATSS KLFSRGFSVT KPKSKTESKE VAAKKHSDAE
101: RRRRLRINSQ FATLRTILPN LVKQDKASVL GETVRYFNEL KKMVQDIPTT PSLEDNLRLD HCNNNRDLAR VVFSCSDREG LMSEVAESMK AVKAKAVRAE
201: IMTVGGRTKC ALFVQGVNGN EGLVKLKKSL KLVVNGKSSS EAKNNNNGGS LLIQQQ
101: RRRRLRINSQ FATLRTILPN LVKQDKASVL GETVRYFNEL KKMVQDIPTT PSLEDNLRLD HCNNNRDLAR VVFSCSDREG LMSEVAESMK AVKAKAVRAE
201: IMTVGGRTKC ALFVQGVNGN EGLVKLKKSL KLVVNGKSSS EAKNNNNGGS LLIQQQ
Arabidopsis Description
BHLH131Transcription factor bHLH131 [Source:UniProtKB/Swiss-Prot;Acc:P0CB25]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.