Factsheet for HORVU3Hr1G018680.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G104800.1	Wheat	cytosol	56.34	86.78
TraesCS3A01G102900.1	Wheat	nucleus, plastid	75.75	81.85
TraesCS3B01G120200.1	Wheat	nucleus, plastid	77.61	80.93
TraesCS3B01G120500.1	Wheat	nucleus	76.87	79.84
TraesCS3D01G105100.2	Wheat	mitochondrion, nucleus	76.12	72.86
EES00272	Sorghum	plastid	64.93	71.9
TraesCS3A01G102600.1	Wheat	extracellular, mitochondrion	80.97	64.97
Zm00001d039764_P001	Maize	nucleus	59.7	61.3
HORVU1Hr1G024280.2	Barley	plastid	43.28	54.72
GSMUA_Achr5P29390_001	Banana	nucleus	37.69	43.35
PGSC0003DMT400071293	Potato	nucleus	30.22	36.16
Solyc03g095980.2.1	Tomato	nucleus	27.99	35.89
PGSC0003DMT400040448	Potato	nucleus	29.1	34.67
HORVU5Hr1G069580.1	Barley	nucleus	26.12	33.33
HORVU3Hr1G027630.3	Barley	nucleus	30.6	32.54
Solyc06g051260.2.1	Tomato	nucleus	27.24	32.44
CDY07066	Canola	nucleus, plastid	30.22	32.02
CDX93211	Canola	nucleus, plastid	30.22	32.02
KRG97707	Soybean	nucleus	32.46	31.64
Bra017024.1-P	Field mustard	nucleus, plastid	29.85	31.62
AT2G40200.1	Thale cress	nucleus	29.48	31.1
KRH14931	Soybean	nucleus, plastid	30.22	30.68
KRH31167	Soybean	nucleus	31.72	30.36
CDY24921	Canola	nucleus	26.49	29.58
CDY07615	Canola	nucleus	25.0	28.76
Bra000177.1-P	Field mustard	nucleus	25.0	28.76
KRH73206	Soybean	golgi, nucleus	30.97	28.23
VIT_13s0067g01350.t01	Wine grape	nucleus	29.85	26.94
HORVU5Hr1G066530.2	Barley	cytosol, nucleus	29.48	21.53
HORVU4Hr1G061760.1	Barley	nucleus	30.6	20.4

Protein Annotations

EnsemblPlants:HORVU3Hr1G018680.1	EnsemblPlantsGene:HORVU3Hr1G018680	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	ncoils:Coil
PANTHER:PTHR12565	PANTHER:PTHR12565:SF190	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000B465E83	UniProt:A0A287KB29	MapMan:15.5.32	:	:

Description

No Description!

Coordinates

chrchr3H:-:48655892..48657787

Molecular Weight (calculated)

28993.4 Da

IEP (calculated)

8.702

GRAVY (calculated)

-0.465

Length

268 amino acids

Sequence
(BLAST)

001: MLGWTAAACK SLQQGNELMP HGDCDPTVCR GPAMAPRQAT SAPPAGPPEV STTSSSTGSG RSATEARALR IHSEAERRRR ERINAHLAAL RRMIPDTKQM
101: DKAALLARVV DQVRHLKRRA SEAAQQTPGL PPEADMVSVE FCCTGDTDDD DRRLYIKASV SCNDRPDLVA GLIQALHGLR LRTVRADVTS LGGRVQHVFT
201: LCKEEDGEGS AAAGRAGLHS LKEAVRQALA KVASPELVYD SSSSSSNQFQ LQTKRQRVLE SHYSIMSI

Best Arabidopsis Sequence Match ( AT2G40200.1 )
(BLAST)

001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE

Arabidopsis Description

BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.