Factsheet for TraesCS3A01G102600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

mitochondrion 3
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	mitochondrion, nucleus, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G120200.1	Wheat	nucleus, plastid	69.46	90.27
TraesCS3A01G102900.1	Wheat	nucleus, plastid	66.77	89.92
TraesCS3D01G104800.1	Wheat	cytosol	46.41	89.08
TraesCS3B01G120500.1	Wheat	nucleus	68.56	88.76
HORVU3Hr1G018680.1	Barley	nucleus	64.97	80.97
EES00272	Sorghum	plastid	50.9	70.25
Zm00001d039764_P001	Maize	nucleus	49.4	63.22
TraesCS1A01G110400.1	Wheat	plastid	36.23	57.08
GSMUA_Achr5P29390_001	Banana	nucleus	29.04	41.63
PGSC0003DMT400071293	Potato	nucleus	25.45	37.95
Solyc03g095980.2.1	Tomato	nucleus	23.05	36.84
TraesCS5A01G245600.1	Wheat	nucleus	21.26	36.79
PGSC0003DMT400040448	Potato	nucleus	22.75	33.78
KRG97707	Soybean	nucleus	27.54	33.45
AT2G40200.1	Thale cress	nucleus	25.15	33.07
CDY07066	Canola	nucleus, plastid	24.85	32.81
CDX93211	Canola	nucleus, plastid	24.85	32.81
KRH31167	Soybean	nucleus	27.25	32.5
Solyc06g051260.2.1	Tomato	nucleus	21.86	32.44
Bra017024.1-P	Field mustard	nucleus, plastid	24.55	32.41
TraesCS2A01G472300.1	Wheat	nucleus	20.36	32.38
TraesCS3A01G142900.1	Wheat	nucleus	25.15	32.31
KRH14931	Soybean	nucleus, plastid	25.15	31.82
CDY24921	Canola	nucleus	22.16	30.83
Bra000177.1-P	Field mustard	nucleus	21.26	30.47
CDY07615	Canola	nucleus	21.26	30.47
KRH73206	Soybean	golgi, nucleus	26.05	29.59
TraesCS5A01G466300.1	Wheat	plastid	21.26	28.4
VIT_13s0067g01350.t01	Wine grape	nucleus	24.85	27.95
TraesCS5A01G230500.1	Wheat	nucleus	23.35	23.28
TraesCS4A01G087000.1	Wheat	nucleus	23.95	19.7

Protein Annotations

EnsemblPlants:TraesCS3A01G102600.1	EnsemblPlantsGene:TraesCS3A01G102600	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF190	PFAM:PF00010	PFscan:PS50888	SEG:seg	SignalP:SignalP-noTM	SMART:SM00353
SUPFAM:SSF47459	TIGR:cd00083	TIGR:cd04873	MapMan:15.5.32	:	:

Description

No Description!

Coordinates

chr3A:-:66271635..66272970

Molecular Weight (calculated)

36662.8 Da

IEP (calculated)

8.833

GRAVY (calculated)

-0.430

Length

334 amino acids

Sequence
(BLAST)

001: MRMYVGRSSL TGKLIIICLL PIQYPSYSIY DDENEVTRRR RTNYCEPPPI HSPRLTPASI SSPSSLSRSC NMLGLMAAPC QSPQGGNELY DDCDPTVYGG
101: RVLLPRQASS APPAGPPELS TTSSSTGSGR TATEARALKV HSEAERRRRV RINAHLTALR RMIPDTKQMD KAALLARVVD QVRHLKRRAS EAAQAQQMPA
201: VPPEADEVSV EFCCTGDTDD DNRRLYMKAS VSCDDRPDLV AGFIQALHGL RLRTVRAEVT SLGGRVRHVF TLCKEEEEEG SAAAGRAGLN SLKEAVRHAL
301: SKVASPELVC GGSPFQFQSK RQRILESHYS IMSI

Best Arabidopsis Sequence Match ( AT2G40200.1 )
(BLAST)

001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE

Arabidopsis Description

BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.