Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g051260.2.1 | Tomato | nucleus | 88.0 | 88.0 |
| PGSC0003DMT400071293 | Potato | nucleus | 62.67 | 62.95 |
| KRH14931 | Soybean | nucleus, plastid | 46.67 | 39.77 |
| VIT_13s0067g01350.t01 | Wine grape | nucleus | 49.78 | 37.71 |
| Bra000177.1-P | Field mustard | nucleus | 37.78 | 36.48 |
| CDY07615 | Canola | nucleus | 37.78 | 36.48 |
| KRH31167 | Soybean | nucleus | 45.33 | 36.43 |
| KRG97707 | Soybean | nucleus | 44.44 | 36.36 |
| KRH73206 | Soybean | golgi, nucleus | 47.11 | 36.05 |
| AT2G40200.1 | Thale cress | nucleus | 39.56 | 35.04 |
| CDY24921 | Canola | nucleus | 36.89 | 34.58 |
| CDY07066 | Canola | nucleus, plastid | 38.22 | 33.99 |
| Bra017024.1-P | Field mustard | nucleus, plastid | 38.22 | 33.99 |
| EES00272 | Sorghum | plastid | 36.44 | 33.88 |
| TraesCS3D01G104800.1 | Wheat | cytosol | 25.78 | 33.33 |
| CDX93211 | Canola | nucleus, plastid | 37.33 | 33.2 |
| GSMUA_Achr5P29390_001 | Banana | nucleus | 34.22 | 33.05 |
| Zm00001d039764_P001 | Maize | nucleus | 35.56 | 30.65 |
| TraesCS3B01G120500.1 | Wheat | nucleus | 35.11 | 30.62 |
| TraesCS3B01G120200.1 | Wheat | nucleus, plastid | 34.67 | 30.35 |
| TraesCS3A01G102900.1 | Wheat | nucleus, plastid | 32.89 | 29.84 |
| HORVU3Hr1G018680.1 | Barley | nucleus | 34.67 | 29.1 |
| TraesCS1D01G112000.1 | Wheat | plastid | 27.11 | 28.91 |
| TraesCS1B01G129200.1 | Wheat | plastid | 27.11 | 28.77 |
| HORVU1Hr1G024280.2 | Barley | plastid | 26.22 | 27.83 |
| TraesCS1A01G110400.1 | Wheat | plastid | 26.22 | 27.83 |
| PGSC0003DMT400026449 | Potato | mitochondrion | 28.44 | 27.23 |
| PGSC0003DMT400060615 | Potato | cytosol | 27.11 | 27.23 |
| TraesCS3D01G105100.2 | Wheat | mitochondrion, nucleus | 33.33 | 26.79 |
| PGSC0003DMT400052622 | Potato | nucleus | 30.22 | 26.67 |
| EES19097 | Sorghum | nucleus, plastid | 27.11 | 26.52 |
| Os05t0163900-01 | Rice | nucleus | 31.56 | 26.2 |
| Zm00001d037528_P001 | Maize | plastid | 29.33 | 24.26 |
| PGSC0003DMT400024185 | Potato | nucleus | 21.33 | 23.53 |
| PGSC0003DMT400021599 | Potato | nucleus | 27.11 | 23.28 |
| PGSC0003DMT400019294 | Potato | nucleus | 26.67 | 22.99 |
| TraesCS3A01G102600.1 | Wheat | extracellular, mitochondrion | 33.78 | 22.75 |
| PGSC0003DMT400002155 | Potato | nucleus | 29.78 | 21.47 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400040448 | EnsemblPlantsGene:PGSC0003DMG400015659 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF181 | PFAM:PF00010 | PFscan:PS50888 | PGSC:PGSC0003DMG400015659 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0002953C35 | UniProt:M1B9X7 | MapMan:15.5.32 | : | : |
Description
Transcription factor bHLH51 [Source:PGSC_GENE;Acc:PGSC0003DMG400015659]
Coordinates
chr6:+:28765115..28766297
Molecular Weight (calculated)
25611.5 Da
IEP (calculated)
7.789
GRAVY (calculated)
-0.432
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDSSCSEYL PETHEILSSW CHNLQEVNCQ LPLIPTNSCY FPTWSQEFSA SRSHSEAEKR RRDRINAQLS TLRKLIPTSE KMDKAGLLRS VVEHVKDLKE
101: RAKEMSTVLN TPSDIDEVII EEEDESSNNN NILVKVSFSC DDRPELFSEL NRGLKNLKLT TIEANITSLG GRIKCIFSLQ SINVVCTTHS LKHSLRVLLA
201: RIATSPSTPN FRIKSKRQRF FLLAT
101: RAKEMSTVLN TPSDIDEVII EEEDESSNNN NILVKVSFSC DDRPELFSEL NRGLKNLKLT TIEANITSLG GRIKCIFSLQ SINVVCTTHS LKHSLRVLLA
201: RIATSPSTPN FRIKSKRQRF FLLAT
001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE
Arabidopsis Description
BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.