Factsheet for TraesCS1A01G110400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G112000.1	Wheat	plastid	95.75	96.21
TraesCS1B01G129200.1	Wheat	plastid	92.45	92.45
HORVU1Hr1G024280.2	Barley	plastid	87.26	87.26
EES19097	Sorghum	nucleus, plastid	52.36	48.26
TraesCS3A01G102900.1	Wheat	nucleus, plastid	55.66	47.58
Os05t0163900-01	Rice	nucleus	55.66	43.54
Zm00001d037528_P001	Maize	plastid	52.36	40.81
TraesCS3A01G102600.1	Wheat	extracellular, mitochondrion	57.08	36.23
GSMUA_Achr5P29390_001	Banana	nucleus	38.68	35.19
TraesCS5A01G245600.1	Wheat	nucleus	29.72	32.64
TraesCS2A01G472300.1	Wheat	nucleus	29.72	30.0
Solyc03g095980.2.1	Tomato	nucleus	28.77	29.19
PGSC0003DMT400071293	Potato	nucleus	30.19	28.57
TraesCS3A01G142900.1	Wheat	nucleus	33.02	26.92
PGSC0003DMT400040448	Potato	nucleus	27.83	26.22
Solyc06g051260.2.1	Tomato	nucleus	27.83	26.22
KRG97707	Soybean	nucleus	33.49	25.82
KRH14931	Soybean	nucleus, plastid	32.08	25.76
Bra017024.1-P	Field mustard	nucleus, plastid	30.66	25.69
AT2G40200.1	Thale cress	nucleus	30.66	25.59
CDY07066	Canola	nucleus, plastid	30.19	25.3
KRH31167	Soybean	nucleus	33.02	25.0
CDX93211	Canola	nucleus, plastid	29.72	24.9
TraesCS5A01G466300.1	Wheat	plastid	28.77	24.4
CDY07615	Canola	nucleus	26.42	24.03
Bra000177.1-P	Field mustard	nucleus	26.42	24.03
CDY24921	Canola	nucleus	26.89	23.75
KRH73206	Soybean	golgi, nucleus	32.08	23.13
VIT_13s0067g01350.t01	Wine grape	nucleus	31.6	22.56
TraesCS5A01G230500.1	Wheat	nucleus	28.77	18.21
TraesCS4A01G087000.1	Wheat	nucleus	30.66	16.01

Protein Annotations

EnsemblPlants:TraesCS1A01G110400.1	EnsemblPlantsGene:TraesCS1A01G110400	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF130	PFAM:PF00010	PFscan:PS50888	SMART:SM00353	SUPFAM:SSF47459	SUPFAM:SSF55021
TIGR:cd04873	MapMan:15.5.32	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:110073002..110073869

Molecular Weight (calculated)

22963.7 Da

IEP (calculated)

8.975

GRAVY (calculated)

-0.195

Length

212 amino acids

Sequence
(BLAST)

001: MATCQAPTSA PELSSSSGRS ATEARSLKVH SLSERRRRER INTHLATLRR MIPDANQMDK ATLLACVVNQ VKELKRKATE TTRLQATAPI PPEANEITVH
101: CYTAAGDNRT TYIRATVSCD DRPGLFLGLA GAFRVLGLRV LRTETASLGG RASHLFVLCK EGGDVGAGLR AMEGAVRQAV AEVAFPEMVC GGSSWSKRER
201: ILEECCPVMY SV

Best Arabidopsis Sequence Match ( AT2G40200.1 )
(BLAST)

001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE

Arabidopsis Description

BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.