Factsheet for TraesCS1D01G112000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G110400.1	Wheat	plastid	96.21	95.75
TraesCS1B01G129200.1	Wheat	plastid	93.36	92.92
HORVU1Hr1G024280.2	Barley	plastid	88.15	87.74
TraesCS3D01G104800.1	Wheat	cytosol	40.76	49.43
EES19097	Sorghum	nucleus, plastid	52.13	47.83
TraesCS3D01G105100.2	Wheat	mitochondrion, nucleus	57.35	43.21
Os05t0163900-01	Rice	nucleus	55.45	43.17
Zm00001d037528_P001	Maize	plastid	51.66	40.07
GSMUA_Achr5P29390_001	Banana	nucleus	39.34	35.62
TraesCS5D01G252300.1	Wheat	nucleus	30.33	30.62
TraesCS2D01G472000.1	Wheat	nucleus	30.81	29.95
Solyc03g095980.2.1	Tomato	nucleus	29.38	29.67
PGSC0003DMT400071293	Potato	nucleus	30.81	29.02
TraesCS3D01G144700.1	Wheat	nucleus	33.18	27.45
PGSC0003DMT400040448	Potato	nucleus	28.91	27.11
Solyc06g051260.2.1	Tomato	nucleus	28.91	27.11
KRG97707	Soybean	nucleus	33.65	25.82
KRH14931	Soybean	nucleus, plastid	32.23	25.76
KRH31167	Soybean	nucleus	33.65	25.36
Bra017024.1-P	Field mustard	nucleus, plastid	30.33	25.3
AT2G40200.1	Thale cress	nucleus	30.33	25.2
CDY07066	Canola	nucleus, plastid	29.86	24.9
CDX93211	Canola	nucleus, plastid	29.38	24.51
TraesCS5D01G479100.1	Wheat	nucleus	28.91	24.3
CDY07615	Canola	nucleus	26.07	23.61
Bra000177.1-P	Field mustard	nucleus	26.07	23.61
CDY24921	Canola	nucleus	26.54	23.33
KRH73206	Soybean	golgi, nucleus	32.23	23.13
VIT_13s0067g01350.t01	Wine grape	nucleus	32.23	22.9
TraesCS5D01G237300.1	Wheat	nucleus	29.86	18.69
TraesCS4D01G217700.1	Wheat	nucleus	31.75	16.5

Protein Annotations

EnsemblPlants:TraesCS1D01G112000.1	EnsemblPlantsGene:TraesCS1D01G112000	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF130	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
SUPFAM:SSF55021	TIGR:cd04873	MapMan:15.5.32	:	:	:

Description

No Description!

Coordinates

chr1D:+:107502431..107503295

Molecular Weight (calculated)

22874.5 Da

IEP (calculated)

8.588

GRAVY (calculated)

-0.240

Length

211 amino acids

Sequence
(BLAST)

001: MATCQAPTSA PELSSSSGRS ATEVRSLKVH SESERRRRER INTHLATLRR MIPDANQMDK ATLLACVVNQ VKELKRKATE TTRLQATAPI PSEANEITVH
101: CYTAAGDNQT TYIRATVSCD DRPGLFVGLA GAFRGLGLRV LRTETASLGG RASHLFVLCK EDGDVGAGLR AMEGAVRQAM AEVAFPEMVC GGSSWSKRER
201: ILECCPVMYS V

Best Arabidopsis Sequence Match ( AT2G40200.1 )
(BLAST)

001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE

Arabidopsis Description

BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.