Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93211 | Canola | nucleus, plastid | 81.5 | 81.82 |
| Bra000177.1-P | Field mustard | nucleus | 74.02 | 80.69 |
| CDY07615 | Canola | nucleus | 74.02 | 80.69 |
| CDY07066 | Canola | nucleus, plastid | 80.31 | 80.63 |
| Bra017024.1-P | Field mustard | nucleus, plastid | 79.92 | 80.24 |
| CDY24921 | Canola | nucleus | 73.23 | 77.5 |
| Solyc03g095980.2.1 | Tomato | nucleus | 35.83 | 43.54 |
| PGSC0003DMT400071293 | Potato | nucleus | 37.8 | 42.86 |
| PGSC0003DMT400040448 | Potato | nucleus | 35.04 | 39.56 |
| KRG97707 | Soybean | nucleus | 42.13 | 38.91 |
| KRH14931 | Soybean | nucleus, plastid | 40.16 | 38.64 |
| KRH31167 | Soybean | nucleus | 42.52 | 38.57 |
| Solyc06g051260.2.1 | Tomato | nucleus | 33.46 | 37.78 |
| KRH73206 | Soybean | golgi, nucleus | 40.94 | 35.37 |
| VIT_13s0067g01350.t01 | Wine grape | nucleus | 40.94 | 35.02 |
| TraesCS3D01G104800.1 | Wheat | cytosol | 22.83 | 33.33 |
| EES00272 | Sorghum | plastid | 31.1 | 32.64 |
| AT3G56770.1 | Thale cress | nucleus | 29.53 | 32.61 |
| TraesCS3A01G102900.1 | Wheat | nucleus, plastid | 31.5 | 32.26 |
| TraesCS3B01G120200.1 | Wheat | nucleus, plastid | 31.89 | 31.52 |
| TraesCS3B01G120500.1 | Wheat | nucleus | 31.89 | 31.4 |
| TraesCS1B01G129200.1 | Wheat | plastid | 25.98 | 31.13 |
| TraesCS1A01G110400.1 | Wheat | plastid | 25.59 | 30.66 |
| TraesCS1D01G112000.1 | Wheat | plastid | 25.2 | 30.33 |
| Zm00001d039764_P001 | Maize | nucleus | 31.1 | 30.27 |
| HORVU1Hr1G024280.2 | Barley | plastid | 25.2 | 30.19 |
| GSMUA_Achr5P29390_001 | Banana | nucleus | 27.17 | 29.61 |
| HORVU3Hr1G018680.1 | Barley | nucleus | 31.1 | 29.48 |
| TraesCS3D01G105100.2 | Wheat | mitochondrion, nucleus | 31.1 | 28.21 |
| Os05t0163900-01 | Rice | nucleus | 29.92 | 28.04 |
| AT2G41130.1 | Thale cress | nucleus | 27.56 | 27.67 |
| EES19097 | Sorghum | nucleus, plastid | 23.62 | 26.09 |
| TraesCS3A01G102600.1 | Wheat | extracellular, mitochondrion | 33.07 | 25.15 |
| Zm00001d037528_P001 | Maize | plastid | 24.41 | 22.79 |
| AT3G25710.1 | Thale cress | nucleus | 29.13 | 21.51 |
| AT1G68810.1 | Thale cress | nucleus | 27.95 | 19.29 |
| AT4G38070.1 | Thale cress | plastid | 19.29 | 19.14 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:818611 | UniProt:A0A178VR58 | ProteinID:AAD25935.1 | EMBL:AB493583 |
| ProteinID:AEC09795.1 | EMBL:AF488586 | ArrayExpress:AT2G40200 | EnsemblPlantsGene:AT2G40200 | RefSeq:AT2G40200 | TAIR:AT2G40200 |
| RefSeq:AT2G40200-TAIR-G | EnsemblPlants:AT2G40200.1 | TAIR:AT2G40200.1 | EMBL:BT029997 | EMBL:BT030051 | UniProt:C0SV80 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | RefSeq:NP_181549.1 | ProteinID:OAP07625.1 | PFAM:PF00010 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF201 | UniProt:Q9XEF0 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00000A37A7 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
Coordinates
chr2:+:16791010..16792376
Molecular Weight (calculated)
28416.2 Da
IEP (calculated)
6.516
GRAVY (calculated)
-0.501
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.