Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000177.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY24921 | Canola | nucleus | 93.99 | 91.25 |
| AT2G40200.1 | Thale cress | nucleus | 80.69 | 74.02 |
| CDX93211 | Canola | nucleus, plastid | 79.4 | 73.12 |
| CDY07066 | Canola | nucleus, plastid | 78.54 | 72.33 |
| Solyc03g095980.2.1 | Tomato | nucleus | 36.48 | 40.67 |
| PGSC0003DMT400071293 | Potato | nucleus | 38.2 | 39.73 |
| PGSC0003DMT400040448 | Potato | nucleus | 36.48 | 37.78 |
| Solyc06g051260.2.1 | Tomato | nucleus | 35.19 | 36.44 |
| KRH14931 | Soybean | nucleus, plastid | 40.34 | 35.61 |
| KRG97707 | Soybean | nucleus | 41.63 | 35.27 |
| KRH31167 | Soybean | nucleus | 42.06 | 35.0 |
| KRH73206 | Soybean | golgi, nucleus | 40.77 | 32.31 |
| VIT_13s0067g01350.t01 | Wine grape | nucleus | 39.48 | 30.98 |
| EES00272 | Sorghum | plastid | 29.61 | 28.51 |
| CDY23874 | Canola | nucleus | 28.76 | 28.27 |
| TraesCS3D01G104800.1 | Wheat | cytosol | 21.03 | 28.16 |
| CDX76011 | Canola | nucleus | 27.9 | 28.02 |
| CDY22504 | Canola | nucleus | 29.18 | 27.98 |
| CDY57584 | Canola | nucleus | 30.47 | 27.95 |
| CDY06944 | Canola | nucleus | 30.47 | 27.95 |
| TraesCS3B01G120200.1 | Wheat | nucleus, plastid | 30.47 | 27.63 |
| CDX79957 | Canola | nucleus | 29.61 | 27.6 |
| TraesCS3B01G120500.1 | Wheat | nucleus | 30.47 | 27.52 |
| TraesCS3A01G102900.1 | Wheat | nucleus, plastid | 28.76 | 27.02 |
| Zm00001d039764_P001 | Maize | nucleus | 30.04 | 26.82 |
| TraesCS1B01G129200.1 | Wheat | plastid | 24.03 | 26.42 |
| TraesCS1A01G110400.1 | Wheat | plastid | 24.03 | 26.42 |
| TraesCS1D01G112000.1 | Wheat | plastid | 23.61 | 26.07 |
| HORVU1Hr1G024280.2 | Barley | plastid | 23.61 | 25.94 |
| Os05t0163900-01 | Rice | nucleus | 30.04 | 25.83 |
| GSMUA_Achr5P29390_001 | Banana | nucleus | 25.32 | 25.32 |
| CDX90384 | Canola | cytosol | 17.6 | 25.15 |
| HORVU3Hr1G018680.1 | Barley | nucleus | 28.76 | 25.0 |
| TraesCS3D01G105100.2 | Wheat | mitochondrion, nucleus | 28.33 | 23.57 |
| EES19097 | Sorghum | nucleus, plastid | 23.18 | 23.48 |
| TraesCS3A01G102600.1 | Wheat | extracellular, mitochondrion | 30.47 | 21.26 |
| Zm00001d037528_P001 | Maize | plastid | 24.46 | 20.96 |
| CDY13580 | Canola | nucleus | 30.04 | 20.9 |
| CDX99756 | Canola | nucleus | 29.61 | 20.72 |
| CDX83546 | Canola | nucleus | 29.61 | 20.6 |
| CDY33592 | Canola | nucleus | 28.76 | 18.93 |
| CDX95989 | Canola | nucleus | 28.33 | 18.7 |
| CDY07364 | Canola | nucleus | 27.9 | 18.41 |
| CDY04259 | Canola | nucleus | 27.04 | 17.8 |
| CDY52514 | Canola | cytosol | 20.17 | 3.27 |
Protein Annotations
| EnsemblPlants:CDY07615 | EnsemblPlantsGene:GSBRNA2T00124713001 | Gene3D:4.10.280.10 | GO:A0A078EZU5 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF201 | PFAM:PF00010 | PFscan:PS50888 | ProteinID:CDY07615 | ProteinID:CDY07615.1 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00025402C8 | UniProt:A0A078EZU5 | MapMan:15.5.32 | : |
Description
BnaA03g18960DBnaA03g18960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EZU5]
Coordinates
chrLK031980:-:97909..99042
Molecular Weight (calculated)
25844.6 Da
IEP (calculated)
8.203
GRAVY (calculated)
-0.396
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSYDSAAA AKWSDSTSPY NMVSWSLLQP GSSDSDLSRF NLGSSDELVG GNDKAESVSR SHRLAEKRRR DRINSHLSAL RKLVPDSDKL DKAALLASVI
101: EQVKELKQEA KESPIFQDLP TEADEVTILP ETNSNTTIFK ASFCCPDQTE AISEIVSVLT KFKLETIQGE IICVGGRMRI NFILKETATT TSVKALKQSL
201: CAALNRITSL TTSSVCRIRS KRQRWFLSSN YSQ
101: EQVKELKQEA KESPIFQDLP TEADEVTILP ETNSNTTIFK ASFCCPDQTE AISEIVSVLT KFKLETIQGE IICVGGRMRI NFILKETATT TSVKALKQSL
201: CAALNRITSL TTSSVCRIRS KRQRWFLSSN YSQ
001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE
Arabidopsis Description
BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.