Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07615 | Canola | nucleus | 91.25 | 93.99 |
| CDX93211 | Canola | nucleus, plastid | 77.92 | 73.91 |
| CDY07066 | Canola | nucleus, plastid | 77.92 | 73.91 |
| AT2G40200.1 | Thale cress | nucleus | 77.5 | 73.23 |
| Solyc03g095980.2.1 | Tomato | nucleus | 35.0 | 40.19 |
| PGSC0003DMT400071293 | Potato | nucleus | 37.08 | 39.73 |
| PGSC0003DMT400040448 | Potato | nucleus | 34.58 | 36.89 |
| KRH14931 | Soybean | nucleus, plastid | 40.0 | 36.36 |
| KRG97707 | Soybean | nucleus | 41.67 | 36.36 |
| Solyc06g051260.2.1 | Tomato | nucleus | 33.33 | 35.56 |
| KRH31167 | Soybean | nucleus | 41.25 | 35.36 |
| KRH73206 | Soybean | golgi, nucleus | 40.42 | 32.99 |
| VIT_13s0067g01350.t01 | Wine grape | nucleus | 39.17 | 31.65 |
| CDY23874 | Canola | nucleus | 30.0 | 30.38 |
| CDY22504 | Canola | nucleus | 30.42 | 30.04 |
| CDX79957 | Canola | nucleus | 30.83 | 29.6 |
| TraesCS3D01G104800.1 | Wheat | cytosol | 21.25 | 29.31 |
| CDY06944 | Canola | nucleus | 30.83 | 29.13 |
| CDY57584 | Canola | nucleus | 30.83 | 29.13 |
| EES00272 | Sorghum | plastid | 29.17 | 28.93 |
| TraesCS3A01G102900.1 | Wheat | nucleus, plastid | 29.58 | 28.63 |
| CDX76011 | Canola | nucleus | 27.5 | 28.45 |
| TraesCS3B01G120200.1 | Wheat | nucleus, plastid | 30.0 | 28.02 |
| TraesCS3B01G120500.1 | Wheat | nucleus | 30.0 | 27.91 |
| GSMUA_Achr5P29390_001 | Banana | nucleus | 26.67 | 27.47 |
| Zm00001d039764_P001 | Maize | nucleus | 29.58 | 27.2 |
| TraesCS1B01G129200.1 | Wheat | plastid | 23.75 | 26.89 |
| TraesCS1A01G110400.1 | Wheat | plastid | 23.75 | 26.89 |
| Os05t0163900-01 | Rice | nucleus | 30.0 | 26.57 |
| TraesCS1D01G112000.1 | Wheat | plastid | 23.33 | 26.54 |
| HORVU3Hr1G018680.1 | Barley | nucleus | 29.58 | 26.49 |
| HORVU1Hr1G024280.2 | Barley | plastid | 23.33 | 26.42 |
| CDX90384 | Canola | cytosol | 17.92 | 26.38 |
| TraesCS3D01G105100.2 | Wheat | mitochondrion, nucleus | 28.75 | 24.64 |
| EES19097 | Sorghum | nucleus, plastid | 23.33 | 24.35 |
| Zm00001d037528_P001 | Maize | plastid | 25.42 | 22.43 |
| TraesCS3A01G102600.1 | Wheat | extracellular, mitochondrion | 30.83 | 22.16 |
| CDX99756 | Canola | nucleus | 30.0 | 21.62 |
| CDY13580 | Canola | nucleus | 29.58 | 21.19 |
| CDX83546 | Canola | nucleus | 29.17 | 20.9 |
| CDY33592 | Canola | nucleus | 29.17 | 19.77 |
| CDY07364 | Canola | nucleus | 28.75 | 19.55 |
| CDX95989 | Canola | nucleus | 28.75 | 19.55 |
| CDY04259 | Canola | nucleus | 27.92 | 18.93 |
| CDY52514 | Canola | cytosol | 20.42 | 3.41 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078GHS3 | UniProt:A0A078GHS3 | EnsemblPlants:CDY24921 | ProteinID:CDY24921 |
| ProteinID:CDY24921.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00028712001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF201 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEC86A | InterPro:bHLH_dom | SEG:seg |
Description
BnaC03g22510DBnaC03g22510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHS3]
Coordinates
chrLK032166:-:170640..171815
Molecular Weight (calculated)
26667.4 Da
IEP (calculated)
7.845
GRAVY (calculated)
-0.405
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSYDSAAA AKWFDSTSPY NMVSWSLQPG SSDSDLSRFN LGSSDELVGG KDRAESVSRS HSLAEKRRRD RINSHLSALR KLVPDSDKLD KAALLARVIE
101: QVKELKQEAK ESPIFQDLPT EADEVTVLPE TISNELNQDT TIFKASFCCP DQTEAISEIV SVLTKFKLET IQAEFICVGG RIRINFIVKE TATTTSAKAL
201: KQSLCAALNR ITSLTSSSTS SVCRIRSKRQ RWFLSSNYSQ
101: QVKELKQEAK ESPIFQDLPT EADEVTVLPE TISNELNQDT TIFKASFCCP DQTEAISEIV SVLTKFKLET IQAEFICVGG RIRINFIVKE TATTTSAKAL
201: KQSLCAALNR ITSLTSSSTS SVCRIRSKRQ RWFLSSNYSQ
001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE
Arabidopsis Description
BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.