Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400071293 | Potato | nucleus | 85.17 | 79.46 |
| Solyc06g051260.2.1 | Tomato | nucleus | 60.77 | 56.44 |
| KRH14931 | Soybean | nucleus, plastid | 51.2 | 40.53 |
| KRG97707 | Soybean | nucleus | 52.15 | 39.64 |
| KRH31167 | Soybean | nucleus | 52.15 | 38.93 |
| VIT_13s0067g01350.t01 | Wine grape | nucleus | 54.07 | 38.05 |
| KRH73206 | Soybean | golgi, nucleus | 52.63 | 37.41 |
| Bra000177.1-P | Field mustard | nucleus | 40.67 | 36.48 |
| CDY07615 | Canola | nucleus | 40.67 | 36.48 |
| AT2G40200.1 | Thale cress | nucleus | 43.54 | 35.83 |
| GSMUA_Achr5P29390_001 | Banana | nucleus | 39.71 | 35.62 |
| CDY24921 | Canola | nucleus | 40.19 | 35.0 |
| CDY07066 | Canola | nucleus, plastid | 42.11 | 34.78 |
| Bra017024.1-P | Field mustard | nucleus, plastid | 41.63 | 34.39 |
| EES00272 | Sorghum | plastid | 39.71 | 34.3 |
| CDX93211 | Canola | nucleus, plastid | 41.15 | 33.99 |
| TraesCS3D01G104800.1 | Wheat | cytosol | 26.32 | 31.61 |
| TraesCS3A01G102900.1 | Wheat | nucleus, plastid | 36.36 | 30.65 |
| TraesCS3B01G120500.1 | Wheat | nucleus | 37.8 | 30.62 |
| TraesCS3B01G120200.1 | Wheat | nucleus, plastid | 37.32 | 30.35 |
| Solyc04g006990.2.1 | Tomato | nucleus | 30.62 | 30.33 |
| HORVU1Hr1G024280.2 | Barley | plastid | 30.62 | 30.19 |
| TraesCS1B01G129200.1 | Wheat | plastid | 30.14 | 29.72 |
| TraesCS1D01G112000.1 | Wheat | plastid | 29.67 | 29.38 |
| Zm00001d039764_P001 | Maize | nucleus | 36.36 | 29.12 |
| TraesCS1A01G110400.1 | Wheat | plastid | 29.19 | 28.77 |
| Solyc07g053290.2.1 | Tomato | nucleus | 34.93 | 28.63 |
| Solyc02g076920.2.1 | Tomato | cytosol, nucleus, plastid | 32.54 | 28.33 |
| EES19097 | Sorghum | nucleus, plastid | 31.1 | 28.26 |
| TraesCS3D01G105100.2 | Wheat | mitochondrion, nucleus | 37.8 | 28.21 |
| HORVU3Hr1G018680.1 | Barley | nucleus | 35.89 | 27.99 |
| Solyc04g076240.1.1 | Tomato | nucleus | 25.84 | 26.34 |
| Solyc10g078380.1.1 | Tomato | nucleus | 32.54 | 26.05 |
| Zm00001d037528_P001 | Maize | plastid | 32.54 | 25.0 |
| Os05t0163900-01 | Rice | nucleus | 31.58 | 24.35 |
| Solyc05g009880.2.1 | Tomato | nucleus | 34.45 | 24.0 |
| Solyc04g014360.2.1 | Tomato | nucleus | 31.1 | 23.99 |
| TraesCS3A01G102600.1 | Wheat | extracellular, mitochondrion | 36.84 | 23.05 |
Protein Annotations
| EnsemblPlants:Solyc03g095980.2.1 | EnsemblPlantsGene:Solyc03g095980.2 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF181 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| SUPFAM:SSF55021 | UniParc:UPI0002767A2A | UniProt:K4BJ20 | MapMan:15.5.32 | : | : |
Description
No Description!
Coordinates
chr3:-:57782036..57782799
Molecular Weight (calculated)
23868.4 Da
IEP (calculated)
6.894
GRAVY (calculated)
-0.575
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSFSSEYC DVNDFLVQNY LPQCSHEGRE SASRSHSEAE KRRRDRINAQ LSTLRKLIPT WEKMDKAALL GSVVDHVKDL KDKTAEISNV LNTPTDTDEV
101: SIEHLNEEED NKGCLIKASF CCDDRPELFS ELQRGIKNLQ LRMMEADITS LGGRIKCVFM LSPNDNYVCI NSLEKSLKAV LSRIAISPST SNYRIKSKRQ
201: RFFLPPQFS
101: SIEHLNEEED NKGCLIKASF CCDDRPELFS ELQRGIKNLQ LRMMEADITS LGGRIKCVFM LSPNDNYVCI NSLEKSLKAV LSRIAISPST SNYRIKSKRQ
201: RFFLPPQFS
001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE
Arabidopsis Description
BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.