Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400024185 | Potato | nucleus | 95.12 | 95.59 |
| VIT_18s0001g07410.t01 | Wine grape | nucleus | 43.9 | 40.72 |
| KRH72457 | Soybean | nucleus | 44.88 | 36.22 |
| KRH16843 | Soybean | cytosol | 41.95 | 35.83 |
| GSMUA_Achr3P06780_001 | Banana | cytosol | 30.73 | 30.73 |
| TraesCS5A01G245600.1 | Wheat | nucleus | 28.29 | 30.05 |
| Os08t0477900-00 | Rice | nucleus | 30.73 | 28.25 |
| Zm00001d005919_P001 | Maize | nucleus | 29.27 | 28.04 |
| GSMUA_Achr9P15140_001 | Banana | plastid | 31.22 | 27.83 |
| TraesCS5B01G243000.1 | Wheat | nucleus | 28.29 | 27.75 |
| TraesCS5D01G252300.1 | Wheat | nucleus | 28.29 | 27.75 |
| TraesCS2A01G472300.1 | Wheat | nucleus | 28.29 | 27.62 |
| HORVU5Hr1G069580.1 | Barley | nucleus | 28.29 | 27.62 |
| TraesCS2B01G494900.1 | Wheat | nucleus | 28.29 | 27.49 |
| Solyc04g006990.2.1 | Tomato | nucleus | 27.8 | 27.01 |
| Zm00001d020763_P001 | Maize | nucleus | 29.76 | 26.75 |
| TraesCS2D01G472000.1 | Wheat | nucleus | 28.29 | 26.73 |
| EER96881 | Sorghum | cytosol, nucleus, peroxisome, plastid | 29.27 | 26.67 |
| Solyc03g095980.2.1 | Tomato | nucleus | 26.34 | 25.84 |
| Zm00001d031818_P001 | Maize | nucleus | 29.76 | 25.52 |
| EES14023 | Sorghum | nucleus | 30.24 | 25.41 |
| Solyc04g014360.2.1 | Tomato | nucleus | 31.22 | 23.62 |
| Solyc10g078380.1.1 | Tomato | nucleus | 28.29 | 22.22 |
| Solyc06g051260.2.1 | Tomato | nucleus | 23.9 | 21.78 |
| Solyc07g053290.2.1 | Tomato | nucleus | 26.83 | 21.57 |
| Solyc02g076920.2.1 | Tomato | cytosol, nucleus, plastid | 23.9 | 20.42 |
| Solyc05g009880.2.1 | Tomato | nucleus | 27.8 | 19.0 |
Protein Annotations
| EnsemblPlants:Solyc04g076240.1.1 | EnsemblPlantsGene:Solyc04g076240.1 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF307 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0002765A76 | UniProt:K4BU62 | MapMan:15.5.32 | : | : |
Description
No Description!
Coordinates
chr4:-:61178846..61180162
Molecular Weight (calculated)
22783.7 Da
IEP (calculated)
10.598
GRAVY (calculated)
-0.475
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSLQGCNN VFLQLVDHQK NEKSNTTKKS KSKDAAVTHA VAERKRRERI NSHLHTLKKL FPHLPKKDKP RVLTEAVTQL KELRKNVAQQ LELSSLFIPS
101: ENDVVIINYC DNINDERTVK TTICCEDRPS LNRDLSSAIQ SVQGRVIKAE MATVGGRTKA ELVVVLGKAN GGEKDVGQLK RALKAVVENR ALGFGSNVML
201: GRRFG
101: ENDVVIINYC DNINDERTVK TTICCEDRPS LNRDLSSAIQ SVQGRVIKAE MATVGGRTKA ELVVVLGKAN GGEKDVGQLK RALKAVVENR ALGFGSNVML
201: GRRFG
001: MQPEVSDQIF YAFLTGGLCA SSTSTTVTSS SDPFATVYED KALASLRNHK EAERKRRARI NSHLNKLRKL LSCNSKTDKS TLLAKVVQRV KELKQQTLEI
101: TDETIPSETD EISVLNIEDC SRGDDRRIIF KVSFCCEDRP ELLKDLMETL KSLQMETLFA DMTTVGGRTR NVLVVAADKE HHGVQSVNFL QNALKSLLER
201: SSKSVMVGHG GGGGEERLKR RRALDHIIMV
101: TDETIPSETD EISVLNIEDC SRGDDRRIIF KVSFCCEDRP ELLKDLMETL KSLQMETLFA DMTTVGGRTR NVLVVAADKE HHGVQSVNFL QNALKSLLER
201: SSKSVMVGHG GGGGEERLKR RRALDHIIMV
Arabidopsis Description
BHLH107Putative transcription factor bHLH107 [Source:UniProtKB/Swiss-Prot;Acc:Q9LET0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.