Factsheet for GSMUA_Achr9P15140_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P06780_001	Banana	cytosol	73.04	81.95
TraesCS5A01G245600.1	Wheat	nucleus	47.83	56.99
Zm00001d005919_P001	Maize	nucleus	50.87	54.67
TraesCS5D01G252300.1	Wheat	nucleus	49.57	54.55
EER96881	Sorghum	cytosol, nucleus, peroxisome, plastid	53.04	54.22
TraesCS5B01G243000.1	Wheat	nucleus	49.13	54.07
Zm00001d020763_P001	Maize	nucleus	52.61	53.07
HORVU5Hr1G069580.1	Barley	nucleus	48.26	52.86
Os08t0477900-00	Rice	nucleus	50.87	52.47
TraesCS2A01G472300.1	Wheat	nucleus	46.09	50.48
TraesCS2B01G494900.1	Wheat	nucleus	45.65	49.76
TraesCS2D01G472000.1	Wheat	nucleus	45.65	48.39
Zm00001d031818_P001	Maize	nucleus	47.83	46.03
EES14023	Sorghum	nucleus	48.26	45.49
VIT_18s0001g07410.t01	Wine grape	nucleus	38.7	40.27
GSMUA_Achr6P30610_001	Banana	nucleus	30.87	37.17
GSMUA_Achr7P07280_001	Banana	nucleus	29.57	35.23
GSMUA_Achr11P...	Banana	nucleus	30.43	35.18
GSMUA_Achr1P21280_001	Banana	nucleus	30.43	35.18
CDX90384	Canola	cytosol	24.78	34.97
KRH16843	Soybean	cytosol	36.09	34.58
KRH72457	Soybean	nucleus	37.83	34.25
PGSC0003DMT400060615	Potato	cytosol	32.17	33.04
PGSC0003DMT400024185	Potato	nucleus	28.26	31.86
Solyc04g076240.1.1	Tomato	nucleus	27.83	31.22
GSMUA_Achr5P29390_001	Banana	nucleus	31.3	30.9
Solyc04g014360.2.1	Tomato	nucleus	33.91	28.78
KRH69661	Soybean	mitochondrion	26.52	28.77
GSMUA_Achr8P23980_001	Banana	nucleus	28.26	28.63
GSMUA_Achr7P10740_001	Banana	nucleus	30.0	27.49
GSMUA_Achr3P03510_001	Banana	nucleus	28.7	27.39
GSMUA_Achr2P20040_001	Banana	nucleus	28.7	26.51
Bra010635.1-P	Field mustard	plastid	25.65	26.34
GSMUA_Achr10P...	Banana	nucleus	28.7	25.78
GSMUA_Achr7P21370_001	Banana	nucleus	30.43	23.81
AT4G38070.1	Thale cress	plastid	26.09	23.44
CDY52514	Canola	cytosol	25.65	4.1

Protein Annotations

EnsemblPlants:GSMUA_Achr9P15140_001	EnsemblPlants:GSMUA_Achr9T15140_001	EnsemblPlantsGene:GSMUA_Achr9G15140_001	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR12565	PANTHER:PTHR12565:SF185	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000295583C	UniProt:M0U0H2	MapMan:15.5.32	:	:

Description

basic helix-loop-helix, putative [Source:GMGC_GENE;Acc:GSMUA_Achr9G15140_001]

Coordinates

chr9:-:9915536..9916315

Molecular Weight (calculated)

24952.9 Da

IEP (calculated)

10.584

GRAVY (calculated)

-0.398

Length

230 amino acids

Sequence
(BLAST)

001: MPSSNALHAC YSLMIWPPRS SSSGGELVRG VGMQPVATGE MVHETRTAGE TRAVRSHSEA ERRRRQRING HLATLRSLLP AATRLDKAAL LGEVVRQVRE
101: LRVRVEEVAV MVPGEGDEVG VEEEEEEGGG GGGRGRVVRA WVCCADRPGL MGELSRAVRS VRARAVRAEM VTVGGRTRSL LELEVSEAAE RGEGRSALQA
201: ALWAVLLTNR TAPAENYSKR ARTSTRFSKT

Best Arabidopsis Sequence Match ( AT4G38070.1 )
(BLAST)

001: MVLLHHVSLS HYQNSSSLFS SSSESILCLF LVLCVMQLEQ GMRPISRCYN PTAYSTTMGR SFFAGAATSS KLFSRGFSVT KPKSKTESKE VAAKKHSDAE
101: RRRRLRINSQ FATLRTILPN LVKQDKASVL GETVRYFNEL KKMVQDIPTT PSLEDNLRLD HCNNNRDLAR VVFSCSDREG LMSEVAESMK AVKAKAVRAE
201: IMTVGGRTKC ALFVQGVNGN EGLVKLKKSL KLVVNGKSSS EAKNNNNGGS LLIQQQ

Arabidopsis Description

BHLH131Transcription factor bHLH131 [Source:UniProtKB/Swiss-Prot;Acc:P0CB25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.