Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P03510_001 | Banana | nucleus | 70.68 | 73.03 |
| GSMUA_Achr10P... | Banana | nucleus | 73.49 | 71.48 |
| GSMUA_Achr7P10740_001 | Banana | nucleus | 64.26 | 63.74 |
| VIT_12s0028g02350.t01 | Wine grape | nucleus | 49.4 | 47.49 |
| GSMUA_Achr6P30610_001 | Banana | nucleus | 35.74 | 46.6 |
| GSMUA_Achr11P... | Banana | nucleus | 36.55 | 45.73 |
| GSMUA_Achr7P07280_001 | Banana | nucleus | 35.34 | 45.6 |
| KRH22294 | Soybean | nucleus | 45.38 | 45.38 |
| GSMUA_Achr1P21280_001 | Banana | nucleus | 36.14 | 45.23 |
| KRH27035 | Soybean | nucleus | 44.98 | 44.98 |
| PGSC0003DMT400052622 | Potato | nucleus | 44.98 | 43.92 |
| Solyc07g053290.2.1 | Tomato | nucleus | 44.98 | 43.92 |
| VIT_14s0068g01580.t01 | Wine grape | nucleus | 46.18 | 43.73 |
| VIT_10s0003g01160.t01 | Wine grape | nucleus | 27.71 | 43.4 |
| TraesCS3A01G142900.1 | Wheat | nucleus | 44.98 | 43.08 |
| KXG31555 | Sorghum | nucleus | 46.18 | 42.59 |
| PGSC0003DMT400026449 | Potato | mitochondrion | 40.16 | 42.55 |
| KRH50172 | Soybean | nucleus | 46.18 | 42.12 |
| TraesCS3D01G144700.1 | Wheat | nucleus | 42.97 | 41.96 |
| KRH71297 | Soybean | nucleus | 44.98 | 41.33 |
| KRH55806 | Soybean | nucleus | 42.97 | 41.31 |
| HORVU3Hr1G027630.3 | Barley | nucleus | 41.77 | 41.27 |
| KRH25720 | Soybean | extracellular, nucleus | 42.57 | 41.09 |
| Solyc02g076920.2.1 | Tomato | cytosol, nucleus, plastid | 38.96 | 40.42 |
| Os01t0218100-01 | Rice | nucleus | 42.97 | 40.07 |
| GSMUA_Achr5P29390_001 | Banana | nucleus | 30.92 | 33.05 |
| GSMUA_Achr8P23980_001 | Banana | nucleus | 28.92 | 31.72 |
| GSMUA_Achr3P06780_001 | Banana | cytosol | 25.3 | 30.73 |
| GSMUA_Achr9P15140_001 | Banana | plastid | 26.51 | 28.7 |
| GSMUA_Achr7P21370_001 | Banana | nucleus | 28.51 | 24.15 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P20040_001 | EnsemblPlants:GSMUA_Achr2T20040_001 | EnsemblPlantsGene:GSMUA_Achr2G20040_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF82 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | SUPFAM:SSF55021 | UniParc:UPI000295EB3C | UniProt:M0S9J5 | MapMan:15.5.32 | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G20040_001]
Coordinates
chr2:+:19970051..19972723
Molecular Weight (calculated)
27242.8 Da
IEP (calculated)
9.927
GRAVY (calculated)
-0.293
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLPDGDPG FFRGFPNGLG FSSGSDGSSS SVVLEDQERS KLVGAPWRLE GGGALDAKTA MAMKSHCEAE RRRRERINGH LAVLRSMVPC ADKLDKAALL
101: AEVIGHVKKL KRNAVEISKG YTIPSDTDEV RVEVQGDAMS TGGFMVKACL CCEDRPWILA DLRQTLHSLH LQTIRAEIST LGGRIKNVFV MRSAKNSRNI
201: DRHHFVASVH QALKSILERI NSQVDFLPRA TFANKRQKIS LLESSSSAS
101: AEVIGHVKKL KRNAVEISKG YTIPSDTDEV RVEVQGDAMS TGGFMVKACL CCEDRPWILA DLRQTLHSLH LQTIRAEIST LGGRIKNVFV MRSAKNSRNI
201: DRHHFVASVH QALKSILERI NSQVDFLPRA TFANKRQKIS LLESSSSAS
001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE
Arabidopsis Description
BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.