Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G144700.1 | Wheat | nucleus | 89.29 | 88.24 |
| TraesCS3A01G142900.1 | Wheat | nucleus | 90.08 | 87.31 |
| Os01t0218100-01 | Rice | nucleus | 61.51 | 58.05 |
| KXG31555 | Sorghum | nucleus | 61.9 | 57.78 |
| GSMUA_Achr7P10740_001 | Banana | nucleus | 45.63 | 45.82 |
| GSMUA_Achr3P03510_001 | Banana | nucleus | 42.46 | 44.4 |
| GSMUA_Achr10P... | Banana | nucleus | 44.84 | 44.14 |
| Solyc07g053290.2.1 | Tomato | nucleus | 42.86 | 42.35 |
| PGSC0003DMT400052622 | Potato | nucleus | 42.46 | 41.96 |
| GSMUA_Achr2P20040_001 | Banana | nucleus | 41.27 | 41.77 |
| VIT_10s0003g01160.t01 | Wine grape | nucleus | 26.19 | 41.51 |
| VIT_12s0028g02350.t01 | Wine grape | nucleus | 41.27 | 40.15 |
| VIT_14s0068g01580.t01 | Wine grape | nucleus | 41.67 | 39.92 |
| KRH22294 | Soybean | nucleus | 37.3 | 37.75 |
| Solyc02g076920.2.1 | Tomato | cytosol, nucleus, plastid | 35.71 | 37.5 |
| KRH27035 | Soybean | nucleus | 36.9 | 37.35 |
| KRH50172 | Soybean | nucleus | 39.68 | 36.63 |
| PGSC0003DMT400026449 | Potato | mitochondrion | 34.13 | 36.6 |
| KRH71297 | Soybean | nucleus | 38.1 | 35.42 |
| KRH25720 | Soybean | extracellular, nucleus | 35.32 | 34.5 |
| KRH55806 | Soybean | nucleus | 35.32 | 34.36 |
| HORVU5Hr1G069580.1 | Barley | nucleus | 28.17 | 33.81 |
| HORVU1Hr1G024280.2 | Barley | plastid | 26.19 | 31.13 |
| HORVU3Hr1G018680.1 | Barley | nucleus | 32.54 | 30.6 |
| HORVU5Hr1G066530.2 | Barley | cytosol, nucleus | 34.52 | 23.71 |
| HORVU4Hr1G061760.1 | Barley | nucleus | 31.75 | 19.9 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G027630.3 | EnsemblPlantsGene:HORVU3Hr1G027630 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF201 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000296C926 | UniProt:M0XZ93 | MapMan:15.5.32 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:119629585..119637632
Molecular Weight (calculated)
26703.5 Da
IEP (calculated)
9.652
GRAVY (calculated)
-0.346
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSGPFSGAV GLYDGFYGGF VGGHEHEHEH EHGFSQRLGA STSGEPGAAD VQKRKGGGRE EKAATALRSH SEAERRRRER INAHLATLRS MVPCTHKMDK
101: AALLAEVINH VKKLKSDAAR VGKHCPVPSG ADEVTVEVVQ QSQASPHHLV VKATLSCGDG CADLFADVRR ALQPLAPRVV GSEVTTLGGR VRITVAMSRE
201: GAVTAASVRQ ALDSVLDKVA SAAAAFEFSP RDSLLASKRR RVSTFDSSSS SS
101: AALLAEVINH VKKLKSDAAR VGKHCPVPSG ADEVTVEVVQ QSQASPHHLV VKATLSCGDG CADLFADVRR ALQPLAPRVV GSEVTTLGGR VRITVAMSRE
201: GAVTAASVRQ ALDSVLDKVA SAAAAFEFSP RDSLLASKRR RVSTFDSSSS SS
001: MCAKKEEEEE EEEDSSEAMN NIQNYQNDLF FHQLISHHHH HHHDPSQSET LGASGNVGSG FTIFSQDSVS PIWSLPPPTS IQPPFDQFPP PSSSPASFYG
101: SFFNRSRAHH QGLQFGYEGF GGATSAAHHH HEQLRILSEA LGPVVQAGSG PFGLQAELGK MTAQEIMDAK ALAASKSHSE AERRRRERIN NHLAKLRSIL
201: PNTTKTDKAS LLAEVIQHVK ELKRETSVIS ETNLVPTESD ELTVAFTEEE ETGDGRFVIK ASLCCEDRSD LLPDMIKTLK AMRLKTLKAE ITTVGGRVKN
301: VLFVTGEESS GEEVEEEYCI GTIEEALKAV MEKSNVEESS SSGNAKRQRM SSHNTITIVE QQQQYNQR
101: SFFNRSRAHH QGLQFGYEGF GGATSAAHHH HEQLRILSEA LGPVVQAGSG PFGLQAELGK MTAQEIMDAK ALAASKSHSE AERRRRERIN NHLAKLRSIL
201: PNTTKTDKAS LLAEVIQHVK ELKRETSVIS ETNLVPTESD ELTVAFTEEE ETGDGRFVIK ASLCCEDRSD LLPDMIKTLK AMRLKTLKAE ITTVGGRVKN
301: VLFVTGEESS GEEVEEEYCI GTIEEALKAV MEKSNVEESS SSGNAKRQRM SSHNTITIVE QQQQYNQR
Arabidopsis Description
BHLH30Transcription factor bHLH30 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.