Factsheet for TraesCS3D01G144700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G142900.1	Wheat	nucleus	92.16	90.38
HORVU3Hr1G027630.3	Barley	nucleus	88.24	89.29
KXG31555	Sorghum	nucleus	62.35	58.89
Os01t0218100-01	Rice	nucleus	60.39	57.68
GSMUA_Achr7P10740_001	Banana	nucleus	46.27	47.01
GSMUA_Achr10P...	Banana	nucleus	45.49	45.31
GSMUA_Achr3P03510_001	Banana	nucleus	42.75	45.23
GSMUA_Achr2P20040_001	Banana	nucleus	41.96	42.97
PGSC0003DMT400052622	Potato	nucleus	41.96	41.96
Solyc07g053290.2.1	Tomato	nucleus	41.96	41.96
VIT_10s0003g01160.t01	Wine grape	nucleus	25.1	40.25
VIT_12s0028g02350.t01	Wine grape	nucleus	40.39	39.77
VIT_14s0068g01580.t01	Wine grape	nucleus	40.39	39.16
KRH22294	Soybean	nucleus	37.25	38.15
KRH27035	Soybean	nucleus	36.86	37.75
Solyc02g076920.2.1	Tomato	cytosol, nucleus, plastid	35.29	37.5
PGSC0003DMT400026449	Potato	mitochondrion	34.12	37.02
KRH50172	Soybean	nucleus	38.04	35.53
KRH25720	Soybean	extracellular, nucleus	35.69	35.27
KRH55806	Soybean	nucleus	35.69	35.14
KRH71297	Soybean	nucleus	36.47	34.32
TraesCS5D01G252300.1	Wheat	nucleus	27.84	33.97
TraesCS1D01G112000.1	Wheat	plastid	27.45	33.18
TraesCS2D01G472000.1	Wheat	nucleus	27.84	32.72
TraesCS3D01G104800.1	Wheat	cytosol	21.18	31.03
TraesCS3D01G105100.2	Wheat	mitochondrion, nucleus	30.98	28.21
TraesCS5D01G479100.1	Wheat	nucleus	27.45	27.89
TraesCS5D01G237300.1	Wheat	nucleus	34.51	26.11
TraesCS4D01G217700.1	Wheat	nucleus	33.33	20.94

Protein Annotations

EnsemblPlants:TraesCS3D01G144700.1	EnsemblPlantsGene:TraesCS3D01G144700	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF201	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
TIGR:cd00083	MapMan:15.5.32	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:108281759..108284861

Molecular Weight (calculated)

26881.9 Da

IEP (calculated)

9.378

GRAVY (calculated)

-0.265

Length

255 amino acids

Sequence
(BLAST)

001: MNSGLFSGAV GLYDGFYGGF GGGHGPEHGF GQQLGASTSS VLLDADVPKR KGGGREEKAA TALRSHSEAE RRRRERINAH LATLRSMLPC TDKMDKAALL
101: AEVINHVKKL KSEAARVGKH CPVPSGADEV TVEVVQQPQE SPHHDRTGAA FLVKATLSCG DGCADLFADV RRALQPLAPR VVGSEVTTLG GRVRITVAMS
201: REGAVTAASV RQALDSVLDR VASAAAAFEF SPRDSLLAGN KRRRVSTFDS SSSSC

Best Arabidopsis Sequence Match ( AT2G40200.1 )
(BLAST)

001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE

Arabidopsis Description

BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.