Factsheet for TraesCS3D01G104800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G120200.1	Wheat	nucleus, plastid	84.48	57.2
TraesCS3B01G120500.1	Wheat	nucleus	83.91	56.59
HORVU3Hr1G018680.1	Barley	nucleus	86.78	56.34
TraesCS3D01G105100.2	Wheat	mitochondrion, nucleus	85.63	53.21
EES00272	Sorghum	plastid	68.39	49.17
TraesCS3A01G102600.1	Wheat	extracellular, mitochondrion	89.08	46.41
Zm00001d039764_P001	Maize	nucleus	62.07	41.38
TraesCS1D01G112000.1	Wheat	plastid	49.43	40.76
GSMUA_Achr5P29390_001	Banana	nucleus	38.51	28.76
PGSC0003DMT400071293	Potato	nucleus	33.91	26.34
Solyc03g095980.2.1	Tomato	nucleus	31.61	26.32
PGSC0003DMT400040448	Potato	nucleus	33.33	25.78
Solyc06g051260.2.1	Tomato	nucleus	32.18	24.89
TraesCS5D01G252300.1	Wheat	nucleus	29.89	24.88
TraesCS2D01G472000.1	Wheat	nucleus	30.46	24.42
KRH14931	Soybean	nucleus, plastid	35.63	23.48
KRG97707	Soybean	nucleus	36.78	23.27
KRH31167	Soybean	nucleus	36.78	22.86
AT2G40200.1	Thale cress	nucleus	33.33	22.83
CDY07066	Canola	nucleus, plastid	32.18	22.13
CDX93211	Canola	nucleus, plastid	32.18	22.13
Bra017024.1-P	Field mustard	nucleus, plastid	31.61	21.74
KRH73206	Soybean	golgi, nucleus	36.21	21.43
CDY24921	Canola	nucleus	29.31	21.25
TraesCS3D01G144700.1	Wheat	nucleus	31.03	21.18
TraesCS5D01G479100.1	Wheat	nucleus	30.46	21.12
Bra000177.1-P	Field mustard	nucleus	28.16	21.03
CDY07615	Canola	nucleus	28.16	21.03
VIT_13s0067g01350.t01	Wine grape	nucleus	34.48	20.2
TraesCS5D01G237300.1	Wheat	nucleus	32.76	16.91
TraesCS4D01G217700.1	Wheat	nucleus	32.18	13.79

Protein Annotations

EnsemblPlants:TraesCS3D01G104800.1	EnsemblPlantsGene:TraesCS3D01G104800	PANTHER:PTHR12565	PANTHER:PTHR12565:SF190	SEG:seg	TIGR:cd04873
MapMan:15.5.32	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:57177998..57178867

Molecular Weight (calculated)

18781.7 Da

IEP (calculated)

7.412

GRAVY (calculated)

-0.149

Length

174 amino acids

Sequence
(BLAST)

001: MIPDTKQMDK AALLARVVDQ VRHLKRRASE AAQLTPAVPP EADVVSVEFC CTGDTDDDDR RLYMKVSVSC DDRPDLVAGL IQALHGLRLR TVRAEVTSLG
101: GRVQHVFTLC KEEEEGGSAG RAGLISLKEA VRLALAKVAS PELVCGGSSG SGSPLQLQSK RQRILESHYS IMSI

Best Arabidopsis Sequence Match ( AT2G40200.1 )
(BLAST)

001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE

Arabidopsis Description

BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.