Factsheet for TraesCS3B01G120500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G120200.1	Wheat	nucleus, plastid	93.02	93.39
TraesCS3A01G102900.1	Wheat	nucleus, plastid	84.5	87.9
TraesCS3D01G104800.1	Wheat	cytosol	56.59	83.91
TraesCS3D01G105100.2	Wheat	mitochondrion, nucleus	87.98	81.07
HORVU3Hr1G018680.1	Barley	nucleus	79.84	76.87
EES00272	Sorghum	plastid	67.05	71.49
TraesCS3A01G102600.1	Wheat	extracellular, mitochondrion	88.76	68.56
Zm00001d039764_P001	Maize	nucleus	63.18	62.45
TraesCS1B01G129200.1	Wheat	plastid	45.35	55.19
GSMUA_Achr5P29390_001	Banana	nucleus	37.98	42.06
PGSC0003DMT400071293	Potato	nucleus	33.33	38.39
Solyc03g095980.2.1	Tomato	nucleus	30.62	37.8
PGSC0003DMT400040448	Potato	nucleus	30.62	35.11
Solyc06g051260.2.1	Tomato	nucleus	29.84	34.22
KRG97707	Soybean	nucleus	36.43	34.18
TraesCS2B01G494900.1	Wheat	nucleus	27.13	33.18
TraesCS5B01G243000.1	Wheat	nucleus	26.74	33.01
KRH14931	Soybean	nucleus, plastid	33.72	32.95
KRH31167	Soybean	nucleus	35.66	32.86
CDY07066	Canola	nucleus, plastid	31.78	32.41
CDX93211	Canola	nucleus, plastid	31.78	32.41
Bra017024.1-P	Field mustard	nucleus, plastid	31.4	32.02
AT2G40200.1	Thale cress	nucleus	31.4	31.89
Bra000177.1-P	Field mustard	nucleus	27.52	30.47
CDY07615	Canola	nucleus	27.52	30.47
KRH73206	Soybean	golgi, nucleus	34.5	30.27
CDY24921	Canola	nucleus	27.91	30.0
VIT_13s0067g01350.t01	Wine grape	nucleus	32.95	28.62
TraesCS5B01G478000.1	Wheat	nucleus	26.36	27.09
TraesCS5B01G229000.1	Wheat	nucleus	29.84	23.05
TraesCS4B01G217400.1	Wheat	nucleus	31.4	19.95

Protein Annotations

EnsemblPlants:TraesCS3B01G120500.1	EnsemblPlantsGene:TraesCS3B01G120500	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF190	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
TIGR:cd00083	MapMan:15.5.32	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:90208961..90210089

Molecular Weight (calculated)

27529.9 Da

IEP (calculated)

8.605

GRAVY (calculated)

-0.318

Length

258 amino acids

Sequence
(BLAST)

001: MAAPCQSPQG GNELMAYDAC YPTVSGGPAL LPRQASSAPP AGPPELSTTS SSTTGSGRTA TEARALKVHS EAERRRRVRI NAHLTALRRM IPDTKQMDKA
101: ALLARVVDQV KHLKRRAGEA AQQTPAVPPE TDEVSIEFCA GDNDSRLYMK ASVSCDDRPD LVAGLIQALH GLRLRTVRAE VTSLGGRVQH VFTLCKEEDE
201: EGSAAAGLAG LTSLKEAARL ALARVASPEL VCGGTGSPFQ FQSKRQRILE SHYSIMSI

Best Arabidopsis Sequence Match ( AT2G40200.1 )
(BLAST)

001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE

Arabidopsis Description

BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.