Factsheet for TraesCS3A01G102900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G120500.1	Wheat	nucleus	87.9	84.5
TraesCS3B01G120200.1	Wheat	nucleus, plastid	85.48	82.49
TraesCS3D01G105100.2	Wheat	mitochondrion, nucleus	91.53	81.07
HORVU3Hr1G018680.1	Barley	nucleus	81.85	75.75
EES00272	Sorghum	plastid	67.34	69.01
TraesCS3A01G102600.1	Wheat	extracellular, mitochondrion	89.92	66.77
Zm00001d039764_P001	Maize	nucleus	63.31	60.15
TraesCS1A01G110400.1	Wheat	plastid	47.58	55.66
GSMUA_Achr5P29390_001	Banana	nucleus	38.31	40.77
PGSC0003DMT400071293	Potato	nucleus	33.06	36.61
Solyc03g095980.2.1	Tomato	nucleus	30.65	36.36
TraesCS5A01G245600.1	Wheat	nucleus	27.82	35.75
TraesCS2A01G472300.1	Wheat	nucleus	28.23	33.33
KRG97707	Soybean	nucleus	36.69	33.09
PGSC0003DMT400040448	Potato	nucleus	29.84	32.89
KRH14931	Soybean	nucleus, plastid	34.68	32.58
KRH31167	Soybean	nucleus	36.29	32.14
CDY07066	Canola	nucleus, plastid	32.26	31.62
CDX93211	Canola	nucleus, plastid	32.26	31.62
Solyc06g051260.2.1	Tomato	nucleus	28.63	31.56
AT2G40200.1	Thale cress	nucleus	32.26	31.5
Bra017024.1-P	Field mustard	nucleus, plastid	31.85	31.23
TraesCS3A01G142900.1	Wheat	nucleus	31.85	30.38
KRH73206	Soybean	golgi, nucleus	35.48	29.93
CDY24921	Canola	nucleus	28.63	29.58
Bra000177.1-P	Field mustard	nucleus	27.02	28.76
CDY07615	Canola	nucleus	27.02	28.76
VIT_13s0067g01350.t01	Wine grape	nucleus	33.87	28.28
TraesCS5A01G466300.1	Wheat	plastid	27.82	27.6
TraesCS5A01G230500.1	Wheat	nucleus	30.65	22.69
TraesCS4A01G087000.1	Wheat	nucleus	31.45	19.21

Protein Annotations

EnsemblPlants:TraesCS3A01G102900.1	EnsemblPlantsGene:TraesCS3A01G102900	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	ncoils:Coil
PANTHER:PTHR12565	PANTHER:PTHR12565:SF190	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	TIGR:cd00083	MapMan:15.5.32	:	:	:

Description

No Description!

Coordinates

chr3A:+:66362779..66363901

Molecular Weight (calculated)

26700.6 Da

IEP (calculated)

8.506

GRAVY (calculated)

-0.398

Length

248 amino acids

Sequence
(BLAST)

001: MAAPGQSPHD ACDHTVSRGP ALLPRQASSA PPAGPPELST TSSSTTGSGR TAPEARALKA HSEAERRRRV RINAHLTALR RMIPDTKQMD KAALLARVVD
101: QVRQLKRRAS EAAQQTPAVP PETDEVSVEF CCTGDTDDDD SRLYIKASVS CDDRPDLVAG FIQALHGLRL RTVRAEVSSL GGRVQHVFTL CKEEEGSAGC
201: AGLNSLKEAV RFALAKVASS ELVCGGSPFQ FQSKRQRILE SHYSIMSI

Best Arabidopsis Sequence Match ( AT2G40200.1 )
(BLAST)

001: MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL
101: LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC
201: NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY SHNE

Arabidopsis Description

BHLH51Transcription factor bHLH51 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEF0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.