Factsheet for TraesCS2A01G472300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G494900.1	Wheat	nucleus	93.33	92.89
TraesCS2D01G472000.1	Wheat	nucleus	91.9	88.94
Os08t0477900-00	Rice	nucleus	79.52	74.89
TraesCS5A01G245600.1	Wheat	nucleus	60.48	65.8
EES14023	Sorghum	nucleus	69.05	59.43
Zm00001d031818_P001	Maize	nucleus	67.62	59.41
GSMUA_Achr3P06780_001	Banana	cytosol	50.0	51.22
GSMUA_Achr9P15140_001	Banana	plastid	50.48	46.09
VIT_18s0001g07410.t01	Wine grape	nucleus	39.52	37.56
CDX90384	Canola	cytosol	26.67	34.36
KRH16843	Soybean	cytosol	37.14	32.5
PGSC0003DMT400060615	Potato	cytosol	33.33	31.25
KRH72457	Soybean	nucleus	37.62	31.1
TraesCS1A01G110400.1	Wheat	plastid	30.0	29.72
PGSC0003DMT400024185	Potato	nucleus	28.1	28.92
TraesCS3A01G142900.1	Wheat	nucleus	35.24	28.46
Solyc04g076240.1.1	Tomato	nucleus	27.62	28.29
TraesCS3A01G102900.1	Wheat	nucleus, plastid	33.33	28.23
TraesCS5A01G466300.1	Wheat	plastid	31.43	26.4
Bra010635.1-P	Field mustard	plastid	27.62	25.89
Solyc04g014360.2.1	Tomato	nucleus	33.33	25.83
KRH69661	Soybean	mitochondrion	25.71	25.47
AT4G38070.1	Thale cress	plastid	28.1	23.05
TraesCS5A01G230500.1	Wheat	nucleus	36.67	22.99
TraesCS3A01G102600.1	Wheat	extracellular, mitochondrion	32.38	20.36
TraesCS4A01G087000.1	Wheat	nucleus	34.76	17.98
CDY52514	Canola	cytosol	27.62	4.03

Protein Annotations

EnsemblPlants:TraesCS2A01G472300.1	EnsemblPlantsGene:TraesCS2A01G472300	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF120	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
TIGR:cd00083	MapMan:15.5.32	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:713935624..713936384

Molecular Weight (calculated)

22778.0 Da

IEP (calculated)

8.889

GRAVY (calculated)

-0.421

Length

210 amino acids

Sequence
(BLAST)

001: MATDGECSTP GKGATVRSHS EAERKRRQRI NAHLATLRTL VPSASRMDKA ALLGEVVRHV RELQGRANDA TEGVVDVVPG ETDEVGVEEG DYINGGSTDD
101: DPRWRRRVRA WVCCADRPGL MSDLGRAVRS VGSARPVRAE IATVGGRTRS VLELDHVYLQ AEPANDRAVA LSTLRAALRT VLLNREELLA AAAAVDGYKR
201: PRLSPVHQLS

Best Arabidopsis Sequence Match ( AT4G38070.1 )
(BLAST)

001: MVLLHHVSLS HYQNSSSLFS SSSESILCLF LVLCVMQLEQ GMRPISRCYN PTAYSTTMGR SFFAGAATSS KLFSRGFSVT KPKSKTESKE VAAKKHSDAE
101: RRRRLRINSQ FATLRTILPN LVKQDKASVL GETVRYFNEL KKMVQDIPTT PSLEDNLRLD HCNNNRDLAR VVFSCSDREG LMSEVAESMK AVKAKAVRAE
201: IMTVGGRTKC ALFVQGVNGN EGLVKLKKSL KLVVNGKSSS EAKNNNNGGS LLIQQQ

Arabidopsis Description

BHLH131Transcription factor bHLH131 [Source:UniProtKB/Swiss-Prot;Acc:P0CB25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.