Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010635.1-P | Field mustard | plastid | 97.55 | 70.98 |
| AT4G38070.1 | Thale cress | plastid | 84.66 | 53.91 |
| KRH69661 | Soybean | mitochondrion | 42.94 | 33.02 |
| PGSC0003DMT400060615 | Potato | cytosol | 41.1 | 29.91 |
| TraesCS5A01G245600.1 | Wheat | nucleus | 33.13 | 27.98 |
| GSMUA_Achr3P06780_001 | Banana | cytosol | 34.36 | 27.32 |
| TraesCS2A01G472300.1 | Wheat | nucleus | 34.36 | 26.67 |
| TraesCS2B01G494900.1 | Wheat | nucleus | 34.36 | 26.54 |
| TraesCS2D01G472000.1 | Wheat | nucleus | 34.97 | 26.27 |
| TraesCS5B01G243000.1 | Wheat | nucleus | 33.13 | 25.84 |
| TraesCS5D01G252300.1 | Wheat | nucleus | 33.13 | 25.84 |
| HORVU5Hr1G069580.1 | Barley | nucleus | 33.13 | 25.71 |
| Zm00001d005919_P001 | Maize | nucleus | 33.74 | 25.7 |
| Os08t0477900-00 | Rice | nucleus | 34.36 | 25.11 |
| GSMUA_Achr9P15140_001 | Banana | plastid | 34.97 | 24.78 |
| EER96881 | Sorghum | cytosol, nucleus, peroxisome, plastid | 33.74 | 24.44 |
| Zm00001d020763_P001 | Maize | nucleus | 33.74 | 24.12 |
| Solyc04g014360.2.1 | Tomato | nucleus | 39.88 | 23.99 |
| CDY23874 | Canola | nucleus | 32.52 | 22.36 |
| Zm00001d031818_P001 | Maize | nucleus | 32.52 | 22.18 |
| CDY22504 | Canola | nucleus | 31.9 | 21.4 |
| EES14023 | Sorghum | nucleus | 31.9 | 21.31 |
| CDX79957 | Canola | nucleus | 32.52 | 21.2 |
| CDY57584 | Canola | nucleus | 31.9 | 20.47 |
| CDY06944 | Canola | nucleus | 31.9 | 20.47 |
| CDX76011 | Canola | nucleus | 28.22 | 19.83 |
| CDX99756 | Canola | nucleus | 39.26 | 19.22 |
| CDY24921 | Canola | nucleus | 26.38 | 17.92 |
| CDY07615 | Canola | nucleus | 25.15 | 17.6 |
| CDY13580 | Canola | nucleus | 35.58 | 17.31 |
| CDX83546 | Canola | nucleus | 35.58 | 17.31 |
| CDX95989 | Canola | nucleus | 36.81 | 17.0 |
| CDY33592 | Canola | nucleus | 36.81 | 16.95 |
| CDY07066 | Canola | nucleus, plastid | 25.77 | 16.6 |
| CDX93211 | Canola | nucleus, plastid | 25.15 | 16.21 |
| CDY07364 | Canola | nucleus | 34.36 | 15.86 |
| CDY04259 | Canola | nucleus | 33.74 | 15.54 |
| CDY52514 | Canola | cytosol | 96.93 | 10.98 |
Protein Annotations
| EnsemblPlants:CDX90384 | EnsemblPlantsGene:GSBRNA2T00150984001 | Gene3D:4.10.280.10 | GO:A0A078DPG6 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF196 | PFAM:PF00010 | PFscan:PS50888 | ProteinID:CDX90384 | ProteinID:CDX90384.1 |
| SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE9E44 | MapMan:15.5.32 | : |
Description
BnaA08g16000D
Coordinates
chrLK031862:-:1491983..1492547
Molecular Weight (calculated)
18171.2 Da
IEP (calculated)
10.591
GRAVY (calculated)
-0.487
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKKHSDAE RRRRLRINCQ FEALRTILPN LIKQDKASVL GETVRYFKEL KKLVNEIPTT PSLEDSLRLG QCKNRDFARV VFSCSDREGL MSEVAESMKA
101: ADAKAVRAEM MTVGGRTKCV LFVQGVNGNE GLVKLKKALK PVVNRKPEAT NNNNAGSLLP QQQ
101: ADAKAVRAEM MTVGGRTKCV LFVQGVNGNE GLVKLKKALK PVVNRKPEAT NNNNAGSLLP QQQ
001: MVLLHHVSLS HYQNSSSLFS SSSESILCLF LVLCVMQLEQ GMRPISRCYN PTAYSTTMGR SFFAGAATSS KLFSRGFSVT KPKSKTESKE VAAKKHSDAE
101: RRRRLRINSQ FATLRTILPN LVKQDKASVL GETVRYFNEL KKMVQDIPTT PSLEDNLRLD HCNNNRDLAR VVFSCSDREG LMSEVAESMK AVKAKAVRAE
201: IMTVGGRTKC ALFVQGVNGN EGLVKLKKSL KLVVNGKSSS EAKNNNNGGS LLIQQQ
101: RRRRLRINSQ FATLRTILPN LVKQDKASVL GETVRYFNEL KKMVQDIPTT PSLEDNLRLD HCNNNRDLAR VVFSCSDREG LMSEVAESMK AVKAKAVRAE
201: IMTVGGRTKC ALFVQGVNGN EGLVKLKKSL KLVVNGKSSS EAKNNNNGGS LLIQQQ
Arabidopsis Description
BHLH131Transcription factor bHLH131 [Source:UniProtKB/Swiss-Prot;Acc:P0CB25]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.